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CyCog 4184: Type II alternative RNA polymerase sigma factor, sigma-70 family
CyCog4184 Annotation Info
Gene name: None
Cluster size: 24
Synonyms:
Associated gene clusters:
Phylogenetic Profile




Protein Members

Locus Tag Alternative Tag Gene Name Length Description Genome Cluster Evidence NCBI COG T4 Cluster
PMED4_18391 PMM1629 333 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: MED4 ortholog COG568
P9313_01361 PMT0127 335 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: MIT9313 ortholog COG568
P9303_01641 350 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: MIT9303 ortholog COG568
NATL1_20821 335 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: NATL1A ortholog COG568
NATL2_20291 PMN2A_1207 335 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: NATL2A ortholog COG568
A9601_18391 344 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: AS9601 ortholog COG568
P9515_18181 333 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: MIT9515 ortholog COG568
P9215_19031 rpoD 344 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: MIT9215 ortholog COG568
P9211_17561 335 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: MIT9211 ortholog COG568
P9312_18731 PMT9312_1722 344 aa type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: MIT9312 ortholog COG568
SS120_18281 Pro1791 rpoD 328 aa DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) Prochlorococcus: SS120 ortholog COG568
P9301_18211 344 aa Type II alternative RNA polymerase sigma factor, sigma-70 family Prochlorococcus: MIT9301 ortholog COG568
S9311_01011 sync_0098 335 aa Type II alternative RNA polymerase sigma factor, sigma-70 family protein Synechococcus: Syn_CC9311 ortholog COG568
S9605_00951 Syncc9605_0093 335 aa type II alternative RNA polymerase sigma factor, sigma-70 family Synechococcus: Syn_CC9605 ortholog COG568
S9902_01421 Syncc9902_0139 332 aa type II alternative RNA polymerase sigma factor, sigma-70 family Synechococcus: Syn_CC9902 ortholog COG568
S8102_01041 SYNW0102 332 aa Type II alternative RNA polymerase sigma factor, sigma-70 family (VIMSS) Synechococcus: Syn_WH8102 ortholog COG568
SynWH7803_0153 SynWH7803_0153 355 aa Alternative RNA polymerase sigma factor, sigma-70 family (RefSeq) Synechococcus: Syn_WH7803 ortholog COG568
SynRCC307_0098 SynRCC307_0098 324 aa Alternative RNA polymerase sigma factor, sigma-70 family (RefSeq) Synechococcus: Syn_RCC307 ortholog COG568
WH7805_08867 WH7805_08867 355 aa type II alternative RNA polymerase sigma factor, sigma-70 family protein (NCBI) Synechococcus: Syn_WH7805 ortholog COG568
P9202_18771 344 aa Prochlorococcus: MIT9202 ortholog COG568
BL107_06099 BL107_06099 332 aa type II alternative RNA polymerase sigma factor, sigma-70 family protein (NCBI) Synechococcus: Syn_BL107 ortholog COG568
RS9916_38072 RS9916_38072 341 aa type II alternative RNA polymerase sigma factor, sigma-70 family protein (NCBI) Synechococcus: Syn_RS9916 ortholog COG568
RS9917_05265 RS9917_05265 309 aa type II alternative RNA polymerase sigma factor, sigma-70 family protein (NCBI) Synechococcus: Syn_RS9917 ortholog COG568
WH5701_03344 WH5701_03344 NA 350 aa type II alternative RNA polymerase sigma factor, sigma-70 family protein (NCBI) Synechococcus: Syn-WH5701 ortholog COG568