CyCog 6172: Pyrimidine dimer DNA glycosylase

    
>P9313_09911
MPLYCCALPFTRWGVLEITFSSTTVFQQRRRLSRLTPPPRQASMLLRPKFQRARITEPFSNKIFCMTRINLVKPSELSDQHLVAEYREIFMVGSALQRSL
KSKNWQRTKEQLPKEFTLNIGHVKFFYNKGKYLHKRYLDLIKEMKCRGMRPDPERQFKKEQWPSDLYKDWEPNAKDIELIRKRIKEKINQKPTWYRWTKN
QDGDSPGNTSESGFLL
    
>P9303_13661
MTRINLVNPRELSDQHLVAEYREIFMVGSALQRSIKSKNWERTKEQLPKEFTLNIGHVKFFYNKGKYLHERYLDLINEMKSRGMRPDPERQFKKEQWPSD
FYNDWEPNAKDIELIRKRIKEKINQKPTWYRWTKNQDGDSSGKTSESGLLL
    
>P9211_11951
MTRINLVKPIELSDQHLIAEYREIFMIGSALQRSMKSPNWNITKESLPKNFTLNTGHVRFFYNKGKYLYKRYLDIIEEMKRRGMNPNPRRLFNKEQWPDE
LYNDWTPNEIDIQVVKERIKEKINQKPHWYRWTI
    
>SS120_15161
MTRINLINPSELSDQHLIAEYREIFMIGSALQRSIKSKTWEKTKKNLPKEFTLNIGHVKFFYNKGKYLHKRYIKLIDEMKCRGMNPNPERQFKKEQWPND
FYKDWGPSAQDIKLIRKRIKEKINQKPNWYRWTKKKATKQAQNIKFL

View Table Format

    
>P9313_09911
TTGCCGCTCTATTGCTGTGCACTCCCATTCACGCGATGGGGTGTTCTGGAGATCACTTTCTCAAGCACGACGGTGTTTCAACAGAGAAGACGTCTGAGTC
GACTGACACCACCACCAAGACAAGCATCGATGCTTCTAAGGCCAAAGTTTCAGAGAGCTCGAATAACTGAACCCTTTTCAAATAAGATCTTTTGTATGAC
AAGAATAAATTTGGTCAAGCCAAGTGAATTATCTGATCAACATTTAGTTGCGGAATATAGAGAAATTTTTATGGTTGGCTCCGCACTCCAACGCTCATTA
AAGTCAAAAAACTGGCAGAGAACCAAAGAACAGCTACCCAAAGAATTCACCTTAAATATTGGTCACGTTAAGTTCTTCTACAACAAAGGTAAGTATTTGC
ATAAAAGATATTTAGACCTGATCAAGGAAATGAAATGCAGAGGTATGCGTCCAGATCCAGAACGTCAATTCAAAAAAGAGCAGTGGCCAAGTGACCTTTA
TAAAGACTGGGAGCCTAATGCAAAAGACATTGAGCTAATAAGAAAAAGAATCAAAGAAAAAATCAATCAAAAGCCCACTTGGTATCGCTGGACAAAAAAC
CAAGATGGTGATTCACCAGGGAATACGTCTGAGTCTGGGTTTTTGCTTTAG
    
>P9303_13661
ATGACAAGAATCAACTTGGTCAATCCAAGAGAATTATCTGATCAACATTTAGTAGCGGAATATAGAGAAATTTTTATGGTTGGCTCAGCACTCCAACGCT
CAATAAAGTCGAAAAACTGGGAGAGAACTAAAGAACAGCTACCTAAAGAATTCACCTTAAATATTGGACACGTTAAGTTCTTCTATAACAAAGGTAAGTA
TTTACATGAAAGATATTTAGATCTCATAAATGAAATGAAAAGCAGAGGCATGCGTCCAGATCCAGAACGTCAATTCAAAAAAGAACAGTGGCCAAGTGAC
TTTTATAATGACTGGGAGCCTAATGCAAAAGACATTGAGCTAATAAGAAAAAGAATCAAAGAAAAAATCAATCAAAAGCCCACTTGGTATCGCTGGACAA
AAAACCAAGATGGTGATTCATCAGGGAAGACGTCTGAGTCTGGGTTATTGCTTTAG
    
>P9211_11951
ATGACTAGAATAAATCTTGTTAAACCTATAGAATTATCTGATCAGCACCTTATTGCCGAATATAGGGAAATTTTCATGATAGGTTCAGCTCTTCAACGGT
CAATGAAATCTCCCAATTGGAATATCACAAAAGAATCTTTGCCTAAAAACTTTACATTAAATACAGGTCATGTAAGATTCTTTTATAATAAAGGAAAGTA
TTTATATAAAAGATATCTAGATATTATAGAAGAAATGAAGAGAAGGGGAATGAATCCAAACCCAAGACGACTATTTAATAAAGAGCAATGGCCAGATGAA
CTATATAATGATTGGACACCTAATGAAATAGATATTCAGGTTGTAAAGGAAAGAATAAAAGAAAAGATCAACCAAAAGCCTCATTGGTATAGATGGACGA
TCTAA
    
>SS120_15161
ATGACAAGAATCAACTTAATAAATCCAAGTGAGCTATCTGATCAACATTTAATTGCAGAATATAGAGAAATTTTCATGATTGGCTCTGCTCTCCAGCGTT
CAATAAAGTCGAAAACCTGGGAAAAAACCAAGAAAAACTTACCCAAAGAATTCACCTTAAATATTGGGCATGTCAAATTCTTCTATAACAAGGGAAAATA
CCTCCACAAAAGATATATAAAGCTGATCGATGAAATGAAATGCAGAGGCATGAATCCAAATCCAGAACGGCAATTCAAAAAAGAGCAGTGGCCTAATGAC
TTTTACAAAGACTGGGGACCTAGCGCTCAAGATATTAAACTTATAAGAAAGAGGATCAAAGAAAAAATCAATCAAAAGCCAAATTGGTATCGCTGGACAA
AAAAAAAGGCAACGAAGCAAGCCCAGAACATTAAATTTTTATAG

Protein Fasta | Transcript Fasta

CyCog6172 Annotation Info
Gene name: None
Cluster size: 4
Synonyms:
Associated gene clusters:

Phylogenetic Profile

Protein Members

Locus Tag	Alternative Tag	Length	Description	Genome	Cluster Evidence
P9313_09911	PMT0842	216 aa	Pyrimidine dimer DNA glycosylase	Prochlorococcus: MIT9313	hmmscan
P9303_13661		151 aa	Deoxyribonuclease (pyrimidine dimer)	Prochlorococcus: MIT9303	ortholog
P9211_11951		134 aa	Deoxyribonuclease	Prochlorococcus: MIT9211	ortholog
SS120_15161	Pro1489	147 aa	Pyrimidine dimer DNA glycosylase/Endonuclease V	Prochlorococcus: SS120	ortholog