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Nitrogen Availability Experiment: Cyanate for log phase
Note:
Report probesets with q<=0.1
Number of probesets to report in each category: up to 50
Report intergenic probesets: no

See all experiments of Nitrogen Availability: Here

Upregulated Probesets in MED4

ProbeSet Gene Gene Description CyCog Log ratio q
MED4_ARR_1381_at PMM1390 possible high light inducible protein 3918 2.00964 0.0
MED4_ARR_0346_x_at PMM0348 possible Spectrin repeat 2711 1.90341 0.0
MED4_ARR_0345_at PMM0347 conserved hypothetical 2709 1.75893 0.0
MED4_ARR_0856_x_at PMM0861 possible Virion host shutoff protein 3315 1.75368 0.0
MED4_RNA_0008_at 1.50692 0.0
MED4_ARR_1356_x_at PMM1365 possible MATH domain 3880 1.49699 0.0
MED4_ARR_0915_x_at PMM0920 Glutamine synthetase, glutamate--ammonia ligase 3376 1.39901 0.0
MED4_ARR_1395_at PMM1404 possible high light inducible protein 3919 1.39435 0.0
MED4_ARR_0813_s_at PMM0818 possible high light inducible protein 1.35947 0.0
MED4_ARR_1387_at PMM1396 possible high light inducible protein 3938 1.32413 0.0
MED4_RNA_0029_at 1.3048 0.0
MED4_ARR_0812_x_at PMM0817 possible high light inducible protein 1.2728 0.0
MED4_RNA_0028_at 1.27088 0.094488
MED4_RNA_0003_at 1.23552 0.0
MED4_RNA_0007_at 1.2344 0.015625
MED4_RNA_0023_at 1.2287 0.0
MED4_ARR_1388_x_at PMM1397 possible high light inducible protein 3939 1.22225 0.0
MED4_ARR_0695_x_at PMM0699 conserved hypothetical 3115 1.20015 0.027027
MED4_RNA_0043_at 1.19479 0.0
MED4_RNA_0018_at 1.19397 0.027027
MED4_RNA_0004_at 1.18 0.015625
MED4_RNA_0037_at 1.17314 0.0
MED4_ARR_0368_x_at PMM0370 putative cyanate ABC transporter, substrate binding protein 2748 1.17116 0.042553
MED4_RNA_0020_at 1.13342 0.0
MED4_ARR_1129_x_at PMM1135 possible high light inducible protein 3634 1.11095 0.0
MED4_RNA_0002_at 1.10847 0.015625
MED4_RNA_0034_at 1.06726 0.0
MED4_RNA_0031_s_at 1.0574 0.0
MED4_RNA_0036_at 1.04835 0.0
MED4_RNA_0019_at 0.989203 0.015625
MED4_RNA_0042_at 0.981611 0.027027
MED4_RNA_0032_at 0.962061 0.015625
MED4_ARR_1112_at PMM1118 possible high light inducible protein 0.959498 0.015625
MED4_ARR_1375_at PMM1384 possible high light inducible protein 3918 0.958348 0.042553
MED4_RNA_0025_at 0.943625 0.0
MED4_ARR_0965_x_at PMM0970 putative urea ABC transporter, substrate binding protein 3427 0.905389 0.015625
MED4_ARR_1391_x_at PMM1400 possible Hemagglutinin-neuraminidase 3531 0.892706 0.0
MED4_ARR_1112_s_at PMM1118 possible high light inducible protein 0.848787 0.0
MED4_ARR_0043_x_at PMM0043 flavoprotein 2388 0.847687 0.070175
MED4_ARR_1376_at PMM1385 possible high light inducible protein 3919 0.840699 0.0
MED4_RNA_0016_at 0.808956 0.0
MED4_ARR_0896_x_at PMM0901 heat shock protein HtpG 3357 0.808899 0.027027
MED4_ARR_1453_x_at PMM1463 Nitrogen regulatory protein P-II 4017 0.770937 0.070175
MED4_RNA_0035_at 0.760126 0.092437
MED4_ARR_1274_x_at PMM1283 Integral membrane protein, interacts with FtsH 3794 0.721331 0.015625
MED4_ARR_1144_x_at PMM1150 putative thioredoxin reductase 3653 0.709861 0.094488
MED4_RNA_0033_at 0.69208 0.015625
MED4_RNA_0017_at 0.666789 0.067961
MED4_ARR_0016_x_at PMM0016 Heat shock protein GrpE 2360 0.612021 0.061225

Down-regulated Probesets in MED4
ProbeSet Gene Gene Description CyCog Log ratio q
MED4_ARR_1660_x_at PMM1672 Fatty acid desaturase, type 1 4227 -1.53468 0.042553
MED4_ARR_0547_x_at PMM0550 Ribulose bisphosphate carboxylase, large chain 2944 -1.18385 0.0
MED4_ARR_0546_x_at PMM0549 carboxysome shell protein CsoS1 2943 -1.12258 0.0
MED4_ARR_0472_at PMM0474 Conserved hypothetical protein 2867 -1.05028 0.0
MED4_ARR_0494_x_at PMM0496 Putative principal RNA polymerase sigma factor 2890 -1.037 0.015625
MED4_ARR_0548_x_at PMM0551 Ribulose bisphosphate carboxylase, small chain 2945 -0.945967 0.0
MED4_ARR_1447_x_at PMM1457 possible ATP synthase subunit 1 4011 -0.934709 0.042553
MED4_ARR_0467_x_at PMM0469 Photosystem I PsaF protein (subunit III) 2862 -0.876265 0.0
MED4_ARR_0141_x_at PMM0142 RNA-binding region RNP-1 (RNA recognition motif) 2493 -0.844895 0.027027
MED4_ARR_0781_x_at PMM0785 phosphoribulokinase 3216 -0.819443 0.015625
MED4_ARR_0763_x_at PMM0767 Fructose-1,6-bisphosphatase/sedoheptulose-1, 7-bis phosphatase 3197 -0.805771 0.015625
MED4_ARR_1598_x_at PMM1609 3-oxoacyl-[acyl-carrier-protein] synthase II 4164 -0.781094 0.038961
MED4_ARR_0201_x_at PMM0202 50S ribosomal protein L10 2553 -0.780022 0.015625
MED4_ARR_1446_x_at PMM1456 ATP synthase A subunit 4010 -0.778235 0.052083
MED4_ARR_0408_x_at PMM0410 30S ribosomal protein S4 2798 -0.751377 0.027027
MED4_ARR_0266_x_at PMM0268 conserved hypothetical protein 2618 -0.722779 0.042553
MED4_ARR_1443_x_at PMM1453 ATP synthase B/B' CF(0) 4007 -0.720256 0.015625
MED4_ARR_0226_x_at PMM0228 Photosystem II manganese-stabilizing protein 2578 -0.709983 0.027027
MED4_ARR_0580_x_at PMM0583 Uroporphyrinogen decarboxylase (URO-D) 2977 -0.708209 0.077586
MED4_ARR_0393_x_at PMM0395 Uncharacterized protein conserved in bacteria 2781 -0.643801 0.042553
MED4_ARR_1597_x_at PMM1608 acyl carrier protein (ACP) 4163 -0.6323 0.042553
MED4_ARR_1445_x_at PMM1455 ATP synthase subunit c 4009 -0.614935 0.038961
MED4_ARR_0901_x_at PMM0906 Photosystem I PsaK protein (subunit X) 3362 -0.607325 0.042553
MED4_ARR_1510_x_at PMM1520 photosystem I subunit VIII (PsaI) 4075 -0.599112 0.042553
MED4_ARR_0466_at PMM0468 Photosystem I PsaJ protein (subunit IX) 2861 -0.586292 0.042553
MED4_ARR_1428_x_at PMM1438 ATP synthase F1, beta subunit 3992 -0.577437 0.094488
MED4_ARR_0200_x_at PMM0201 50S ribosomal protein L7/L12 2552 -0.575066 0.094488
MED4_ARR_1444_x_at PMM1454 ATP synthase B/B' CF(0) 4008 -0.564423 0.070175
MED4_ARR_0270_at PMM0272 Photosystem II protein PsbK 2622 -0.562647 0.070175
MED4_ARR_0313_x_at PMM0315 Photosystem II PsbB protein (CP47) 2666 -0.539734 0.070175
MED4_ARR_0777_x_at PMM0781 Fructose-bisphosphate/sedoheptulose-1, 7-bisphosph ate aldolase 3212 -0.53903 0.094488
MED4_ARR_1441_x_at PMM1451 ATP synthase F1, alpha subunit 4005 -0.520708 0.094488
MED4_ARR_0624_x_at PMM0627 light-harvesting complex protein 3022 -0.518451 0.067961
MED4_ARR_0295_x_at PMM0297 Cytochrome b559 alpha-subunit 2647 -0.516137 0.077586