Browse Site Data
GenomesIron Availability Experiment: -Fe for 48 h
Note:Report probesets with q<=0.1
Number of probesets to report in each category: up to 50
Report intergenic probesets: no See all experiments of Iron Availability: Here
Upregulated Probesets in MED4
| ProbeSet | Gene | Gene Description | CyCog | Log ratio | q |
|---|---|---|---|---|---|
| MED4_ARR_0360_x_at | PMM0362 | hypothetical | 2732 | 3.404085654 | 1.56237e-06 |
| MED4_ARR_1915_x_at | PMM1999 | Conserved hypothetical protein | 3923 | 2.092883966 | 5.056e-07 |
| MED4_ARR_1403_x_at | PMM1412 | conserved hypothetical protein | 3630 | 2.079292767 | 8.64365e-06 |
| MED4_ARR_0800_x_at | PMM0805 | hypothetical | 3236 | 2.006118461 | 3.47193e-06 |
| MED4_ARR_1165_x_at | PMM1171 | Flavodoxin | 3681 | 1.835115615 | 2.95114e-06 |
| MED4_ARR_1857_x_at | PMM2005 | Conserved hypothetical protein | 3943 | 1.826192536 | 3.45987e-05 |
| MED4_ARR_0801_x_at | PMM0806 | Bacterial regulatory proteins, Crp family | 3237 | 1.724650272 | 2.82094e-06 |
| MED4_ARR_0461_x_at | PMM0463 | conserved hypothetical protein | 2856 | 1.712815854 | 5.15967e-06 |
| MED4_ARR_1884_x_at | PMM1910 | Conserved hypothetical protein | 3310 | 1.712815854 | 7.69348e-06 |
| MED4_ARR_1391_x_at | PMM1400 | possible Hemagglutinin-neuraminidase | 3531 | 1.711935357 | 5.70244e-05 |
| MED4_RNA_0061_x_at | 1.711494907 | 3.13094e-06 | |||
| MED4_ARR_1158_x_at | PMM1164 | putative iron ABC transporter, substrate binding protein | 3673 | 1.678071905 | 1.5045e-05 |
| MED4_RNA_0071_x_at | 1.555325359 | 9.06731e-05 | |||
| MED4_ARR_1129_x_at | PMM1135 | possible high light inducible protein | 3634 | 1.546956178 | 2.92944e-06 |
| MED4_ARR_1740_x_at | NA | 11594 | 1.510961919 | 0.000119531 | |
| MED4_ARR_1716_x_at | PMM1828 | Conserved hypothetical protein | 2735 | 1.507921465 | 2.62461e-05 |
| MED4_RNA_0045_x_at | 1.501821265 | 9.1305e-06 | |||
| MED4_ARR_1891_x_at | PMM1874 | Conserved hypothetical protein | 3114 | 1.495695163 | 6.997e-05 |
| MED4_RNA_0056_x_at | 1.477677328 | 7.09756e-05 | |||
| MED4_ARR_0343_x_at | PMM0345 | putative bacterioferritin comigratory protein | 2707 | 1.440420721 | 2.06146e-05 |
| MED4_ARR_1906_x_at | PMM1864 | Conserved hypothetical protein | 3093 | 1.415217825 | 2.8166e-06 |
| MED4_RNA_0028_at | 1.357270476 | 2.62679e-05 | |||
| MED4_ARR_1799_x_at | PMM1870 | Conserved hypothetical protein | 3102 | 1.329410671 | 0.003147783 |
| MED4_ARR_1758_x_at | PMM1915 | Conserved hypothetical protein | 3329 | 1.236951759 | 0.000308232 |
| MED4_RNA_0080_x_at | 1.232046713 | 3.18983e-05 | |||
| MED4_ARR_0812_x_at | PMM0817 | possible high light inducible protein | 3634 | 1.231432408 | 2.05508e-05 |
| MED4_ARR_1804_x_at | PMM1832 | Conserved hypothetical protein | 2744 | 1.212258044 | 7.92868e-05 |
| MED4_ARR_0888_x_at | PMM0893 | possible GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase | 3349 | 1.206018004 | 2.65112e-05 |
| MED4_ARR_1866_x_at | NA | 11596 | 1.194087052 | 3.49053e-05 | |
| MED4_ARR_1722_x_at | NA | 11595 | 1.178236585 | 1.15318e-05 | |
| MED4_ARR_1768_x_at | PMM1940 | Conserved hypothetical protein | 3498 | 1.176960992 | 0.000294494 |
| MED4_ARR_1388_x_at | PMM1397 | possible high light inducible protein | 3939 | 1.169283661 | 2.5063e-05 |
| MED4_ARR_1823_x_at | NA | 11593 | 1.158983251 | 4.86292e-05 | |
| MED4_ARR_1858_x_at | PMM1815 | Conserved hypothetical protein | 2698 | 1.158983251 | 2.73217e-05 |
| MED4_ARR_1415_x_at | PMM1424 | possible Uncharacterized protein family UPF003 | 3976 | 1.144699025 | 0.000297738 |
| MED4_ARR_0953_x_at | PMM0958 | conserved hypothetical | 3415 | 1.141432791 | 8.92548e-05 |
| MED4_ARR_0334_x_at | PMM0336 | conserved hypothetical | 2691 | 1.136191386 | 2.71244e-05 |
| MED4_ARR_0698_x_at | PMM0702 | possible DUP family | 3119 | 1.115699153 | 2.91642e-05 |
| MED4_ARR_1744_x_at | PMM2013 | Conserved hypothetical protein | 3967 | 1.113700499 | 0.000986343 |
| MED4_ARR_1737_x_at | PMM1982 | Conserved hypothetical protein | 3893 | 1.111699072 | 3.23168e-05 |
| MED4_ARR_1785_x_at | PMM1973 | Conserved hypothetical protein | 3812 | 1.108357178 | 6.13248e-05 |
| MED4_ARR_1112_at | PMM1118 | possible high light inducible protein | 3918 | 1.09963185 | 3.11831e-05 |
| MED4_ARR_1760_x_at | PMM1831 | Conserved hypothetical protein | 2743 | 1.098284796 | 0.000818288 |
| MED4_ARR_1936_x_at | PMM1983 | Conserved hypothetical protein | 3894 | 1.075190314 | 0.000519595 |
| MED4_ARR_1791_x_at | PMM1986 | Conserved hypothetical protein | 3898 | 1.066950244 | 0.037482395 |
| MED4_ARR_0813_s_at | PMM0818 | possible high light inducible protein | 3918 | 1.062812492 | 3.20593e-05 |
| MED4_ARR_1942_x_at | PMM1980 | Conserved hypothetical protein | 3890 | 1.044044333 | 0.000146811 |
| MED4_ARR_1036_x_at | PMM1041 | conserved hypothetical protein | 3531 | 1.030689204 | 0.00172478 |
| MED4_ARR_1924_x_at | PMM2004 | Conserved hypothetical protein | 3937 | 1.029276182 | 0.000979536 |
| MED4_ARR_1792_x_at | PMM1854 | Conserved hypothetical protein | 3053 | 1.019346089 | 0.000625241 |
Down-regulated Probesets in MED4
| ProbeSet | Gene | Gene Description | CyCog | Log ratio | q |
|---|---|---|---|---|---|
| MED4_ARR_1736_x_at | NA | 11605 | -1.465938398 | 3.47831e-05 | |
| MED4_ARR_1365_at | PMM1374 | possible Type I restriction modification DNA s | 3899 | -1.2968993 | 4.88811e-05 |
| MED4_ARR_1729_x_at | PMM1951 | Conserved hypothetical protein | 7607 | -1.293358943 | 4.76848e-05 |
| MED4_ARR_1721_x_at | PMM2012 | Conserved hypothetical protein | 3961 | -1.220950447 | 0.00061066 |
| MED4_ARR_1864_x_at | PMM2001 | Conserved hypothetical protein | 3925 | -1.161653263 | 0.012648704 |
| MED4_RNA_0077_x_at | -1.15521265 | 6.05417e-06 | |||
| MED4_ARR_1759_x_at | PMM1856 | Conserved hypothetical protein | 3058 | -1.142417045 | 2.65217e-05 |
| MED4_ARR_1509_x_at | PMM1519 | Photosystem I PsaL protein (subunit XI) | 4074 | -1.104697379 | 0.000132953 |
| MED4_ARR_1343_x_at | PMM1352 | ferredoxin | 3865 | -1.092340172 | 5.86874e-05 |
| MED4_ARR_1805_x_at | PMM1936 | Conserved hypothetical protein | 3486 | -1.061902439 | 0.019014933 |
| MED4_ARR_0459_x_at | PMM0461 | Cytochrome f | 2854 | -1.061902439 | 3.53644e-05 |
| MED4_ARR_1783_x_at | PMM1820 | Conserved hypothetical protein | 2714 | -1.052894948 | 0.000195597 |
| MED4_ARR_1863_x_at | PMM1994 | Conserved hypothetical protein | 3915 | -1.017417053 | 7.14809e-05 |
| MED4_ARR_0460_x_at | PMM0462 | Rieske iron-sulfur protein | 2855 | -1.01449957 | 3.11253e-05 |
| MED4_ARR_0701_x_at | PMM0705 | two-component response regulator, phosphate | 3124 | -1.005782353 | 0.000307207 |
| MED4_ARR_1901_x_at | PMM1993 | Conserved hypothetical protein | 3913 | -0.962969269 | 0.059622075 |
| MED4_ARR_1704_x_at | PMM1991 | Conserved hypothetical protein | 3908 | -0.954557029 | 0.000609474 |
| MED4_ARR_1922_x_at | PMM1811 | Conserved hypothetical protein | 2689 | -0.921390165 | 0.00060911 |
| MED4_ARR_0995_x_at | PMM1000 | conserved hypothetical protein | 3470 | -0.921390165 | 0.000914596 |
| MED4_ARR_1868_x_at | PMM1826 | Conserved hypothetical protein | 2729 | -0.918660373 | 0.000297364 |
| MED4_ARR_0207_x_at | PMM0208 | Enolase | 2559 | -0.875671865 | 0.00012047 |
| MED4_ARR_1817_x_at | PMM1990 | Conserved hypothetical protein | 2439 | -0.873027144 | 0.000933549 |
| MED4_ARR_1833_x_at | PMM1934 | Conserved hypothetical protein | 3476 | -0.873027144 | 0.000477807 |
| MED4_ARR_1898_x_at | PMM1949 | Conserved hypothetical protein | 3514 | -0.846843212 | 0.000709682 |
| MED4_ARR_0397_x_at | PMM0399 | Putative deoxyribose-phosphate aldolase | 2785 | -0.846843212 | 0.00029903 |
| MED4_ARR_0763_x_at | PMM0767 | Fructose-1,6-bisphosphatase/sedoheptulose-1, 7-bis phosphatase | 3197 | -0.841662973 | 0.000172967 |
| MED4_ARR_1483_x_at | PMM1493 | Predicted nucleic-acid-binding protein implicated in transcription termination | 4048 | -0.833927324 | 0.001116804 |
| MED4_ARR_0764_x_at | PMM0768 | glutamyl-tRNA reductase | 3198 | -0.821126042 | 0.000277921 |
| MED4_ARR_0640_x_at | PMM0643 | putative homoserine O-succinyltransferase | 3038 | -0.81857936 | 0.000481523 |
| MED4_ARR_1836_x_at | PMM1928 | Conserved hypothetical protein | 3462 | -0.816037165 | 0.000380896 |
| MED4_ARR_0781_x_at | PMM0785 | phosphoribulokinase | 3216 | -0.813499442 | 0.000479028 |
| MED4_ARR_0225_x_at | PMM0227 | ATP-sulfurylase | 2577 | -0.808437349 | 0.000118102 |
| MED4_ARR_1510_x_at | PMM1520 | photosystem I subunit VIII (PsaI) | 4075 | -0.800877358 | 0.000649163 |
| MED4_ARR_1393_x_at | PMM1402 | Conserved hypothetical protein | 3946 | -0.788364747 | 0.001206949 |
| MED4_ARR_1917_x_at | PMM1805 | Conserved hypothetical protein | 2439 | -0.77349147 | 0.00040742 |
| MED4_ARR_1843_x_at | NA | 7516 | -0.77349147 | 0.001326605 | |
| MED4_ARR_1153_x_at | PMM1159 | Maf-like protein | 3664 | -0.768567592 | 0.005342226 |
| MED4_ARR_1860_x_at | PMM1961 | Conserved hypothetical protein | 3632 | -0.76611194 | 0.006031712 |
| MED4_RNA_0048_x_at | -0.75389599 | 0.006617214 | |||
| MED4_ARR_0376_x_at | PMM0378 | conserved hypothetical protein | 2756 | -0.749038426 | 0.001882732 |
| MED4_ARR_1325_x_at | PMM1334 | Lipid-A-disaccharide synthetase | 3847 | -0.74178261 | 0.003234713 |
| MED4_ARR_0074_x_at | PMM0075 | Uncharacterized protein conserved in bacteria | 2422 | -0.74178261 | 0.000735374 |
| MED4_ARR_0458_x_at | PMM0460 | putative prolipoprotein diacylglyceryl transferase | 2853 | -0.734563104 | 0.000751008 |
| MED4_ARR_0354_x_at | PMM0356 | proline iminopeptidase | 2724 | -0.727379545 | 0.000930879 |
| MED4_ARR_1645_x_at | PMM1657 | Clp protease ATP-binding subunit, ClpX | 4212 | -0.722610301 | 0.000522762 |
| MED4_ARR_0946_x_at | PMM0951 | carbamoyl-phosphate synthase small chain | 3406 | -0.722610301 | 0.002542581 |
| MED4_ARR_1877_x_at | PMM1839 | Conserved hypothetical protein | 2763 | -0.720231578 | 0.001280408 |
| MED4_ARR_1665_x_at | PMM1677 | conserved hypothetical protein | 4233 | -0.715485867 | 0.002106232 |
| MED4_ARR_0199_x_at | PMM0200 | possible ribonuclease HI | 2551 | -0.710755715 | 0.000482446 |
| MED4_ARR_1599_x_at | PMM1610 | Transketolase | 4165 | -0.703689439 | 0.001856964 |