Browse Site Data
GenomesIron Availability Experiment: -Fe for 70 h rescue
Note:Report probesets with q<=0.1
Number of probesets to report in each category: up to 50
Report intergenic probesets: no See all experiments of Iron Availability: Here
Upregulated Probesets in MED4
| ProbeSet | Gene | Gene Description | CyCog | Log ratio | q |
|---|---|---|---|---|---|
| MED4_ARR_1729_x_at | PMM1951 | Conserved hypothetical protein | 7607 | 2.426533138 | 2.96176e-08 |
| MED4_ARR_1817_x_at | PMM1990 | Conserved hypothetical protein | 2439 | 2.218781168 | 3.05378e-08 |
| MED4_ARR_1704_x_at | PMM1991 | Conserved hypothetical protein | 3908 | 2.201947456 | 4.43573e-08 |
| MED4_ARR_1898_x_at | PMM1949 | Conserved hypothetical protein | 3514 | 2.183645305 | 1.78205e-08 |
| MED4_ARR_1783_x_at | PMM1820 | Conserved hypothetical protein | 2714 | 2.087123344 | 3.29035e-08 |
| MED4_ARR_1365_at | PMM1374 | possible Type I restriction modification DNA s | 3899 | 2.083043129 | 2.07726e-07 |
| MED4_ARR_1736_x_at | NA | 11605 | 1.955684776 | 4.64518e-07 | |
| MED4_ARR_1759_x_at | PMM1856 | Conserved hypothetical protein | 3058 | 1.953451501 | 3.31917e-08 |
| MED4_ARR_1023_x_at | PMM1028 | conserved hypothetical | 3327 | 1.937721026 | 2.98771e-08 |
| MED4_ARR_1786_x_at | PMM1868 | Conserved hypothetical protein | 3098 | 1.873813198 | 2.01378e-07 |
| MED4_RNA_0077_x_at | 1.831066511 | 1.55747e-08 | |||
| MED4_ARR_1721_x_at | PMM2012 | Conserved hypothetical protein | 3961 | 1.820485343 | 7.63445e-07 |
| MED4_ARR_1917_x_at | PMM1805 | Conserved hypothetical protein | 2439 | 1.789937869 | 2.75931e-08 |
| MED4_ARR_1868_x_at | PMM1826 | Conserved hypothetical protein | 2729 | 1.760433875 | 3.19607e-08 |
| MED4_ARR_1929_x_at | NA | 7708 | 1.754032318 | 8.71058e-07 | |
| MED4_ARR_1896_x_at | 1.720716243 | 2.05594e-07 | |||
| MED4_RNA_0072_x_at | 1.695993813 | 2.52794e-07 | |||
| MED4_ARR_1343_x_at | PMM1352 | ferredoxin | 3865 | 1.64385619 | 2.43575e-07 |
| MED4_ARR_1860_x_at | PMM1961 | Conserved hypothetical protein | 3632 | 1.63784206 | 1.71217e-05 |
| MED4_ARR_1922_x_at | PMM1811 | Conserved hypothetical protein | 2689 | 1.62058641 | 1.53924e-06 |
| MED4_ARR_1825_x_at | 1.61022759 | 0.000963021 | |||
| MED4_RNA_0049_x_at | 1.606915942 | 7.6758e-05 | |||
| MED4_RNA_0048_x_at | 1.579662897 | 1.88802e-05 | |||
| MED4_ARR_1780_x_at | NA | 11592 | 1.494159564 | 2.05187e-06 | |
| MED4_ARR_1509_x_at | PMM1519 | Photosystem I PsaL protein (subunit XI) | 4074 | 1.33571191 | 2.97842e-06 |
| MED4_ARR_1370_x_at | PMM1379 | putative dape gene and orf2 | 3909 | 1.332851122 | 8.57393e-07 |
| MED4_ARR_1708_x_at | PMM1935 | Conserved hypothetical protein | 3484 | 1.295135249 | 3.68262e-06 |
| MED4_ARR_0995_x_at | PMM1000 | conserved hypothetical protein | 3470 | 1.294547234 | 3.7588e-05 |
| MED4_ARR_1863_x_at | PMM1994 | Conserved hypothetical protein | 3915 | 1.277984747 | 2.57398e-06 |
| MED4_ARR_1843_x_at | NA | 7516 | 1.259423152 | 5.75252e-05 | |
| MED4_ARR_1393_x_at | PMM1402 | Conserved hypothetical protein | 3946 | 1.241230036 | 1.12013e-06 |
| MED4_ARR_0764_x_at | PMM0768 | glutamyl-tRNA reductase | 3198 | 1.183962835 | 8.77905e-07 |
| MED4_ARR_1871_x_at | PMM1989 | Conserved hypothetical protein | 3906 | 1.164786278 | 7.22101e-06 |
| MED4_ARR_0579_x_at | PMM0582 | Nucleoside-diphosphate-sugar epimerases | 2976 | 1.140124224 | 7.51374e-06 |
| MED4_ARR_1848_x_at | NA | 11607 | 1.140124224 | 3.74906e-06 | |
| MED4_RNA_0074_x_at | 1.136847604 | 1.46084e-05 | |||
| MED4_ARR_1510_x_at | PMM1520 | photosystem I subunit VIII (PsaI) | 4075 | 1.109694865 | 6.01534e-06 |
| MED4_ARR_0225_x_at | PMM0227 | ATP-sulfurylase | 2577 | 1.105678078 | 5.82412e-07 |
| MED4_ARR_1429_x_at | PMM1439 | ATP synthase, Epsilon subunit | 3993 | 1.09963185 | 1.48702e-05 |
| MED4_ARR_1651_x_at | PMM1663 | putative photosystem I assembly related protein Ycf37 | 4218 | 1.098284796 | 1.3321e-05 |
| MED4_ARR_1756_x_at | PMM1931 | Conserved hypothetical protein | 3467 | 1.092883966 | 1.24785e-05 |
| MED4_ARR_1900_x_at | PMM1992 | Conserved hypothetical protein | 3910 | 1.086104371 | 1.25524e-05 |
| MED4_ARR_1828_x_at | PMM1925 | Conserved hypothetical protein | 3447 | 1.048236186 | 1.03243e-05 |
| MED4_ARR_1222_x_at | PMM1229 | Dehydrogenase, E1 component | 3799 | 1.038436182 | 4.86937e-06 |
| MED4_ARR_1881_x_at | PMM1998 | Conserved hypothetical protein | 3922 | 1.01720929 | 5.888e-05 |
| MED4_ARR_1366_at | PMM1375 | possible M protein repeat | 3900 | 0.994217647 | 1.9388e-05 |
| MED4_ARR_1223_x_at | PMM1230 | dehydrogenase E1 component beta subunit | 3386 | 0.947105052 | 6.13836e-05 |
| MED4_ARR_1599_x_at | PMM1610 | Transketolase | 4165 | 0.946356572 | 3.96795e-05 |
| MED4_ARR_0781_x_at | PMM0785 | phosphoribulokinase | 3216 | 0.944108799 | 4.70296e-05 |
| MED4_ARR_1617_x_at | PMM1629 | Type II alternative RNA polymerase sigma factor, sigma-70 family | 4184 | 0.929790998 | 9.29767e-06 |
Down-regulated Probesets in MED4
| ProbeSet | Gene | Gene Description | CyCog | Log ratio | q |
|---|---|---|---|---|---|
| MED4_ARR_0360_x_at | PMM0362 | hypothetical | 2732 | -4.058893689 | 1.64021e-08 |
| MED4_ARR_0800_x_at | PMM0805 | hypothetical | 3236 | -3.662003536 | 7.99799e-08 |
| MED4_ARR_1158_x_at | PMM1164 | putative iron ABC transporter, substrate binding protein | 3673 | -3.625934282 | 5.26368e-10 |
| MED4_ARR_0801_x_at | PMM0806 | Bacterial regulatory proteins, Crp family | 3237 | -3.53951953 | 1.03174e-09 |
| MED4_ARR_0334_x_at | PMM0336 | conserved hypothetical | 2691 | -2.522840789 | 1.66458e-09 |
| MED4_ARR_1391_x_at | PMM1400 | possible Hemagglutinin-neuraminidase | 3531 | -2.373327247 | 9.63508e-09 |
| MED4_ARR_1403_x_at | PMM1412 | conserved hypothetical protein | 3630 | -2.293358943 | 1.72757e-08 |
| MED4_RNA_0071_x_at | -2.210896782 | 6.59834e-08 | |||
| MED4_ARR_1857_x_at | PMM2005 | Conserved hypothetical protein | 3943 | -2.064917477 | 1.79955e-08 |
| MED4_ARR_0461_x_at | PMM0463 | conserved hypothetical protein | 2856 | -2.035046947 | 1.54e-07 |
| MED4_ARR_1740_x_at | NA | 11594 | -1.971430848 | 3.08841e-07 | |
| MED4_ARR_1165_x_at | PMM1171 | Flavodoxin | 3681 | -1.954557029 | 2.78502e-08 |
| MED4_ARR_1027_x_at | PMM1032 | ABC transporter, substrate binding protein, possibly Mn. | 3520 | -1.878321443 | 4.22394e-08 |
| MED4_ARR_1902_x_at | PMM1829 | Conserved hypothetical protein | 2741 | -1.805912948 | 0.000742777 |
| MED4_ARR_1722_x_at | NA | 11595 | -1.775959726 | 8.18544e-08 | |
| MED4_ARR_1744_x_at | PMM2013 | Conserved hypothetical protein | 3967 | -1.77102743 | 5.03445e-07 |
| MED4_ARR_0335_x_at | PMM0337 | conserved hypothetical protein | 2693 | -1.698997744 | 1.66565e-06 |
| MED4_ARR_1915_x_at | PMM1999 | Conserved hypothetical protein | 3923 | -1.54793177 | 8.17976e-08 |
| MED4_ARR_0062_x_at | PMM0063 | conserved hypothetical protein | 2410 | -1.531156057 | 2.81179e-07 |
| MED4_ARR_1710_x_at | PMM1996 | Conserved hypothetical protein | 3920 | -1.481968507 | 0.000568776 |
| MED4_ARR_0343_x_at | PMM0345 | putative bacterioferritin comigratory protein | 2707 | -1.469929258 | 4.1437e-07 |
| MED4_ARR_1129_x_at | PMM1135 | possible high light inducible protein | 3634 | -1.461958547 | 2.48761e-07 |
| MED4_ARR_1758_x_at | PMM1915 | Conserved hypothetical protein | 3329 | -1.442222329 | 6.52583e-06 |
| MED4_ARR_1415_x_at | PMM1424 | possible Uncharacterized protein family UPF003 | 3976 | -1.411195433 | 2.62434e-06 |
| MED4_ARR_1832_x_at | PMM1830 | Conserved hypothetical protein | 2742 | -1.380821784 | 0.000553768 |
| MED4_ARR_1036_x_at | PMM1041 | conserved hypothetical protein | 3531 | -1.380821784 | 1.13462e-05 |
| MED4_ARR_1866_x_at | NA | 11596 | -1.373327247 | 1.74167e-06 | |
| MED4_ARR_1382_x_at | PMM1391 | possible Helix-turn-helix protein, copG family | 7162 | -1.36215794 | 1.47399e-05 |
| MED4_ARR_1906_x_at | PMM1864 | Conserved hypothetical protein | 3093 | -1.343732465 | 1.11872e-06 |
| MED4_ARR_1112_at | PMM1118 | possible high light inducible protein | 3918 | -1.329159664 | 4.7613e-07 |
| MED4_ARR_1388_x_at | PMM1397 | possible high light inducible protein | 3939 | -1.318325858 | 1.11737e-06 |
| MED4_ARR_0812_x_at | PMM0817 | possible high light inducible protein | 3634 | -1.286304185 | 1.76956e-06 |
| MED4_ARR_1785_x_at | PMM1973 | Conserved hypothetical protein | 3812 | -1.275786313 | 2.44626e-07 |
| MED4_ARR_1891_x_at | PMM1874 | Conserved hypothetical protein | 3114 | -1.268816758 | 1.75537e-05 |
| MED4_ARR_0644_x_at | PMM0647 | conserved hypothetical protein | 3042 | -1.23786383 | 2.99925e-06 |
| MED4_ARR_0813_s_at | PMM0818 | possible high light inducible protein | 3918 | -1.231074664 | 1.72198e-06 |
| MED4_ARR_1804_x_at | PMM1832 | Conserved hypothetical protein | 2744 | -1.217591435 | 2.22366e-06 |
| MED4_ARR_1823_x_at | NA | 11593 | -1.217591435 | 0.000108127 | |
| MED4_ARR_1858_x_at | PMM1815 | Conserved hypothetical protein | 2698 | -1.214240226 | 2.34032e-06 |
| MED4_ARR_0698_x_at | PMM0702 | possible DUP family | 3119 | -1.187707155 | 7.35299e-06 |
| MED4_ARR_0856_x_at | PMM0861 | possible Virion host shutoff protein | 3315 | -1.187707155 | 2.33018e-06 |
| MED4_ARR_1751_x_at | PMM1833 | Conserved hypothetical protein | 2745 | -1.187707155 | 1.78971e-06 |
| MED4_ARR_1716_x_at | PMM1828 | Conserved hypothetical protein | 2735 | -1.181149439 | 1.57161e-05 |
| MED4_ARR_1387_at | PMM1396 | possible high light inducible protein | 3938 | -1.15521265 | 3.27191e-06 |
| MED4_ARR_1870_x_at | PMM1876 | Conserved hypothetical protein | 3120 | -1.13606155 | 1.71567e-06 |
| MED4_RNA_0080_x_at | -1.13289427 | 8.96714e-06 | |||
| MED4_ARR_0494_x_at | PMM0496 | Putative principal RNA polymerase sigma factor | 2890 | -1.12973393 | 4.55243e-06 |
| MED4_ARR_1395_at | PMM1404 | possible high light inducible protein | 3919 | -1.120294234 | 7.59809e-07 |
| MED4_ARR_0888_x_at | PMM0893 | possible GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase | 3349 | -1.120294234 | 1.47655e-06 |
| MED4_ARR_0833_at | PMM0838 | possible Nucleoside diphosphate kinase | 3277 | -1.114035243 | 6.68082e-05 |