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Nitrogen Availability Experiment: N deprivation for 6 h
Note:
Report probesets with q<=0.05
Number of probesets to report in each category: up to 20
Report intergenic probesets: no

See all experiments of Nitrogen Availability: Here

Upregulated Probesets in MED4

ProbeSet Gene Gene Description CyCog Log ratio q
MED4_ARR_0953_x_at PMM0958 conserved hypothetical 3415 6.01862 0.0
MED4_ARR_0368_x_at PMM0370 putative cyanate ABC transporter, substrate binding protein 2748 5.72849 0.0
MED4_ARR_1452_x_at PMM1462 conserved hypothetical protein 4016 5.61782 0.0
MED4_ARR_0965_x_at PMM0970 putative urea ABC transporter, substrate binding protein 3427 5.37088 0.0
MED4_ARR_0915_x_at PMM0920 Glutamine synthetase, glutamate--ammonia ligase 3376 5.06051 0.0
MED4_ARR_0244_x_at PMM0246 Global nitrogen regulatory protein, CRP family of transcriptional regulators 2596 4.45086 0.0
MED4_ARR_0683_x_at PMM0687 conserved hypothetical 4653 3.85155 0.0
MED4_ARR_0372_at PMM0374 mttA/Hcf106 family 2703 3.74935 0.0
MED4_ARR_1036_x_at PMM1041 conserved hypothetical protein 3531 3.49777 0.0
MED4_ARR_0334_x_at PMM0336 conserved hypothetical 2691 3.47154 0.0
MED4_ARR_1453_x_at PMM1463 Nitrogen regulatory protein P-II 4017 2.85561 0.0
MED4_ARR_1381_at PMM1390 possible high light inducible protein 3918 2.62849 0.0
MED4_ARR_1032_x_at PMM1037 conserved hypothetical 3527 2.58773 0.00502513
MED4_ARR_0357_at PMM0359 hypothetical 2728 2.56258 0.0
MED4_ARR_0335_x_at PMM0337 conserved hypothetical protein 2693 2.44307 0.0
MED4_ARR_0966_x_at PMM0971 putative urea ABC transporter 3428 2.33635 0.0
MED4_ARR_0369_x_at PMM0371 putative cyanate ABC transporter 2749 2.2811 0.0
MED4_ARR_1069_x_at PMM1074 Glucose-6-phosphate dehydrogenase 3565 2.25315 0.0
MED4_ARR_0363_x_at PMM0365 possible DsrE-like protein 2737 2.15865 0.0
MED4_ARR_0723_x_at PMM0727 Serine/threonine specific protein phosphatase 3149 1.90887 0.00909091

Down-regulated Probesets in MED4
ProbeSet Gene Gene Description CyCog Log ratio q
MED4_ARR_0547_x_at PMM0550 Ribulose bisphosphate carboxylase, large chain 2944 -3.23622 0.0
MED4_ARR_1442_x_at PMM1452 ATP synthase, delta (OSCP) subunit 4006 -3.10923 0.0
MED4_ARR_1443_x_at PMM1453 ATP synthase B/B' CF(0) 4007 -2.97457 0.0
MED4_ARR_1547_x_at PMM1557 50S ribosomal protein L4 4112 -2.83286 0.0
MED4_ARR_1440_x_at PMM1450 ATP synthase gamma subunit 4004 -2.79542 0.0
MED4_ARR_0548_x_at PMM0551 Ribulose bisphosphate carboxylase, small chain 2945 -2.61319 0.0
MED4_ARR_1441_x_at PMM1451 ATP synthase F1, alpha subunit 4005 -2.51596 0.0
MED4_ARR_1548_x_at PMM1558 50S ribosomal protein L3 4113 -2.51524 0.0
MED4_ARR_1531_x_at PMM1541 50S ribosomal protein L15 4096 -2.49677 0.0
MED4_ARR_1530_x_at PMM1540 preprotein translocase SecY subunit 4095 -2.41652 0.0
MED4_ARR_1444_x_at PMM1454 ATP synthase B/B' CF(0) 4008 -2.38204 0.0
MED4_ARR_0549_x_at PMM0552 carboxysome shell protein CsoS2 7401 -2.22679 0.0
MED4_ARR_1445_x_at PMM1455 ATP synthase subunit c 4009 -2.19507 0.0
MED4_ARR_1288_x_at PMM1297 Indole-3-glycerol phosphate synthase 3808 -2.19242 0.00502513
MED4_ARR_0041_x_at PMM0041 possible reductase 2386 -2.17519 0.0
MED4_ARR_1544_x_at PMM1554 30S Ribosomal protein S19 4109 -2.10729 0.0
MED4_ARR_0670_x_at PMM0673 Putative phosphonate binding protein for ABC transporter 3074 -2.10018 0.00502513
MED4_ARR_1543_x_at PMM1553 50S ribosomal protein L22 4108 -2.07854 0.0
MED4_ARR_0546_x_at PMM0549 carboxysome shell protein CsoS1 2943 -2.06491 0.0
MED4_ARR_1447_x_at PMM1457 possible ATP synthase subunit 1 4011 -2.05593 0.0

Upregulated Probesets in MIT9313
ProbeSet Gene Gene Description CyCog Log ratio q
MIT9313_ARR_0975_x_at PMT0990 possible high light inducible protein 3918 4.53815 0.0
MIT9313_ARR_2221_x_at PMT2239 Ferredoxin--nitrite reductase 5786 4.33411 0.0
MIT9313_ARR_2222_x_at PMT2240 Formate and nitrite transporters 5788 3.57382 0.0
MIT9313_ARR_0976_x_at PMT0991 possible tRNA synthetases class I (E and Q) 4995 3.3424 0.0
MIT9313_ARR_2211_x_at PMT2229 putative urea ABC transporter, substrate binding protein 3427 3.24241 0.0
MIT9313_ARR_0977_at PMT0992 possible high light inducible protein 3918 3.1329 0.0
MIT9313_ARR_1813_x_at PMT1831 Global nitrogen regulatory protein, CRP family of transcriptional regulators 2596 3.03245 0.0
MIT9313_ARR_2223_x_at PMT2241 possible Homeobox domain 5789 2.52624 0.0
MIT9313_ARR_0924_x_at PMT0939 hypothetical protein 3139 2.48419 0.0
MIT9313_ARR_1835_x_at PMT1853 Ammonium transporter family 2613 2.19274 0.0
MIT9313_ARR_2010_x_at PMT2028 Translation initiation factor SUI1 2516 2.00307 0.042394
MIT9313_ARR_0592_x_at PMT0601 Glutamine synthetase, glutamate--ammonia ligase 3376 1.72452 0.0
MIT9313_ARR_2210_x_at PMT2228 putative urea ABC transporter 3428 1.60479 0.0
MIT9313_RNA_0016_at 1.52083 0.042394
MIT9313_ARR_1187_x_at PMT1203 carboxysome shell protein CsoS2 5164 1.5031 0.0
MIT9313_ARR_0936_x_at PMT0951 conserved hypothetical protein 2756 1.49266 0.0
MIT9313_ARR_2156_x_at PMT2174 Fatty acid desaturase, type 1 4227 1.23519 0.0168539
MIT9313_ARR_1128_x_at PMT1144 conserved hypothetical protein 5137 1.11782 0.0
MIT9313_ARR_2216_x_at PMT2234 Urease gamma subunit 3422 1.0555 0.0
MIT9313_ARR_0621_x_at PMT0631 hypothetical 4671 1.04991 0.0

Down-regulated Probesets in MIT9313
ProbeSet Gene Gene Description CyCog Log ratio q
MIT9313_ARR_1462_x_at PMT1479 possible Extracellular link domain 5306 -3.48508 0.0
MIT9313_ARR_1091_x_at PMT1107 Exodeoxyribonuclease V 5116 -2.3378 0.042394
MIT9313_ARR_2082_x_at PMT2100 Aminotransferases class-I 2549 -2.25151 0.0489978
MIT9313_ARR_1557_x_at PMT1574 possible membrane permease or ABC transporter component 3179 -1.97063 0.0
MIT9313_ARR_1413_x_at PMT1430 putative methyltransferase for Ribosomal protein L11 3866 -1.93114 0.042394
MIT9313_ARR_1908_x_at PMT1926 Glycosyl transferase, group 1 5581 -1.84513 0.0168539
MIT9313_ARR_1716_x_at PMT1734 50S ribosomal protein L23 4111 -1.84222 0.0
MIT9313_ARR_1715_x_at PMT1733 50S ribosomal protein L4 4112 -1.8408 0.0
MIT9313_ARR_1556_x_at PMT1573 ABC-transporter component 3178 -1.53228 0.0
MIT9313_ARR_1717_x_at PMT1735 50S ribosomal protein L2 4110 -1.30209 0.0
MIT9313_ARR_0892_x_at PMT0907 possible Octicosapeptide repeat 3445 -1.23319 0.0
MIT9313_ARR_1729_x_at PMT1747 50S ribosomal protein L18 4098 -1.15248 0.0
MIT9313_ARR_1737_x_at PMT1755 Bacterial RNA polymerase, alpha chain 4090 -1.12006 0.0
MIT9313_ARR_1714_x_at PMT1732 50S ribosomal protein L3 4113 -1.11191 0.0
MIT9313_ARR_1455_x_at PMT1472 ATP synthase A subunit 4010 -1.10451 0.0
MIT9313_ARR_1726_x_at PMT1744 50S ribosomal protein L5 4101 -1.09663 0.0
MIT9313_ARR_1771_x_at PMT1789 S1 RNA binding domain:Ribonuclease E and G 4056 -1.06348 0.042394
MIT9313_ARR_1256_x_at PMT1272 Putative principal RNA polymerase sigma factor 2890 -1.06309 0.0
MIT9313_ARR_1727_x_at PMT1745 30S ribosomal protein S8 4100 -1.06219 0.0
MIT9313_ARR_1724_x_at PMT1742 50S Ribosomal protein L14 4103 -1.06191 0.0