Browse Site Data
GenomesAffymetrix Probeset: MED4_ARR_0016_x_at
| Probeset Position: 18283..19002(+) |
| Number of probes: 11 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 1239.33 | 1878.0 | 0.65992 | -0.599637 | 0.0438 |
| Phosphate Starvation | P-depleted | 4 h | 782.3 | 608.55 | 1.28551 | 0.362346 | 0.2847 |
| Phosphate Starvation | P-depleted | 12 h | 1213.0 | 877.03 | 1.38308 | 0.467881 | 0.154 |
| Phosphate Starvation | P-depleted | 24 h | 1435.0 | 1593.0 | 0.900816 | -0.150696 | 0.742 |
| Phosphate Starvation | P-depleted | 48 h | 1003.3 | 734.25 | 1.36643 | 0.45041 | 0.119 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 0.585918 | -0.77123 | 0.0523256 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 0.831624 | -0.265996 | 0.919388 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 0.684258 | -0.547388 | 0.323272 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 0.859075 | -0.219143 | 0.661509 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 0.292442 | -1.77378 | 0.0 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 0.444346 | -1.17024 | 0.241071 |
| Nitrogen Availability | Urea | log phase | NA | NA | 1.064 | 0.0894951 | 0.897248 |
| Nitrogen Availability | Cyanate | log phase | NA | NA | 1.5284 | 0.612021 | 0.0612245 |
| Light Sensing | High light | 45 min | NA | NA | 1.5663 | 0.647361 | 0.0 |
| Light Sensing | White light | 45 min | NA | NA | 1.9303 | 0.948825 | 0.0 |
| Light Sensing | Blue light | 45 min | NA | NA | 1.5654 | 0.646531 | 0.0 |
| Light Sensing | Red light | 45 min | NA | NA | 1.0502 | 0.0706641 | 0.0 |
| Light Sensing | Green light | 45 min | NA | NA | 0.7331 | -0.447918 | 0.0 |
| Light Sensing | White light+DCMU | 45 min | NA | NA | 0.733114 | -0.447891 | 0.0 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.146655222 | 0.899850864 |
| Iron Availability | -Fe | 12 h | 0.0 | NA | None | 0.606915942 | 0.016053898 |
| Iron Availability | -Fe | 24 h | 0.0 | NA | None | 0.187767747 | 0.223502601 |
| Iron Availability | -Fe | 48 h | 0.0 | NA | None | 0.237563718 | 0.148029972 |
| Iron Availability | -Fe | 70 h rescue | 0.0 | NA | None | -0.354759487 | 0.009411719 |
Protein Info: PMED4_00151 Heat shock protein GrpE (grpE)
Location: 18283 - 19002 (+) on scaffold: NC_005072
Protein Length: 239 aa
|
Genome: MED4 Alternative Tag: PMM0016 MicrobesOnline ID: VIMSS565346 CyCog: CyCog2360 CyCog Size: 24 NCBI COG: COG576 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MED4_ARR_0016_x_at |
>PMED4_00151 MIEKQSDNVENLEDNVSQEVNKNEDSSVIENQTSEDKQTLEVDDENIYAEDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKV QLVSKALTAILPIVDNFERARQQLKPESEEAQTLHRSYQGLYKQLVEVLKQQGVSPMRVVAQQFDPKLHEAVLREPSQEFNEDIIIEELQRGYHLEGKVL RHALVKVSMGPGQQNSQEPEEKDKVEEDIDSENPISEEN >PMED4_00151 ATGATTGAAAAACAATCAGATAATGTCGAAAATCTAGAAGATAATGTTTCTCAAGAGGTTAATAAAAATGAAGATTCCTCTGTGATTGAAAATCAAACCA GCGAAGATAAACAGACACTAGAGGTAGATGATGAAAATATTTATGCAGAAGATTTAAAAAATACCATAACCAATAATGACGCAAGATTAGAACAATTAGA AAAAGAGCATGAAACTTTAAAAAGTCAGTATGTAAGAATTGCTGCCGATTTCGATAACTTTAGAAAAAGACAGTCTCGAGATCAAGATGATTTAAAAGTT CAACTTGTTTCCAAAGCTTTAACAGCAATATTGCCGATTGTTGATAATTTTGAAAGAGCAAGACAACAACTAAAACCCGAAAGTGAGGAGGCTCAAACAT TGCACAGAAGTTATCAAGGACTATATAAACAATTAGTGGAAGTGTTAAAACAACAAGGAGTTTCTCCAATGAGGGTAGTTGCACAACAATTTGATCCTAA GTTACATGAAGCGGTTTTAAGGGAACCAAGTCAGGAGTTTAATGAGGATATAATTATTGAAGAATTACAGCGTGGATATCATTTAGAAGGTAAGGTGTTA AGACATGCATTAGTTAAAGTTTCAATGGGTCCTGGCCAACAAAATTCACAAGAGCCTGAAGAAAAGGATAAAGTTGAAGAAGATATTGATTCAGAGAATC CTATCTCTGAAGAAAATTAA