Browse Site Data
GenomesAffymetrix Probeset: MED4_ARR_0965_x_at
| Probeset Position: 926568..927887(+) |
| Number of probes: 17 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 954.23 | 1581.5 | 0.60337 | -0.728885 | 0.0285 |
| Phosphate Starvation | P-depleted | 4 h | 1946.0 | 2258.0 | 0.861825 | -0.214534 | 0.3536 |
| Phosphate Starvation | P-depleted | 12 h | 1712.33 | 1707.0 | 1.00312 | 0.00449772 | 0.8832 |
| Phosphate Starvation | P-depleted | 24 h | 1770.0 | 1884.33 | 0.939326 | -0.0903023 | 0.781 |
| Phosphate Starvation | P-depleted | 48 h | 807.3 | 1520.5 | 0.530944 | -0.913369 | 0.0256 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 1.71664 | 0.779586 | 0.0523256 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 15.0189 | 3.90871 | 0.0 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 41.3805 | 5.37088 | 0.0 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 13.4558 | 3.75016 | 0.0 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 14.6155 | 3.86942 | 0.0 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 14.2685 | 3.83477 | 0.0 |
| Nitrogen Availability | Urea | log phase | NA | NA | 0.893975 | -0.161693 | 0.841021 |
| Nitrogen Availability | Cyanate | log phase | NA | NA | 1.87305 | 0.905389 | 0.015625 |
| Light Sensing | High light | 45 min | NA | NA | 0.5362 | -0.899157 | 0.0 |
| Light Sensing | White light | 45 min | NA | NA | 0.9772 | -0.0332743 | 0.0 |
| Light Sensing | Blue light | 45 min | NA | NA | 1.5001 | 0.585059 | 0.0 |
| Light Sensing | Red light | 45 min | NA | NA | 0.5283 | -0.920571 | 0.0 |
| Light Sensing | Green light | 45 min | NA | NA | 0.7787 | -0.36086 | 0.0 |
| Light Sensing | White light+DCMU | 45 min | NA | NA | 0.778683 | -0.360892 | 0.0 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.147957881 | 0.906882973 |
| Iron Availability | -Fe | 12 h | 0.0 | NA | None | 0.327687364 | 0.156484794 |
| Iron Availability | -Fe | 24 h | 0.0 | NA | None | 0.339137385 | 0.028425796 |
| Iron Availability | -Fe | 48 h | 0.0 | NA | None | 0.270229907 | 0.093476343 |
| Iron Availability | -Fe | 70 h rescue | 0.0 | NA | None | -0.015957574 | 0.363954169 |
Protein Info: PMED4_10821 putative urea ABC transporter, substrate binding protein (urtA)
Location: 926568 - 927887 (+) on scaffold: NC_005072
Protein Length: 439 aa
|
Genome: MED4 Alternative Tag: PMM0970 MicrobesOnline ID: VIMSS566325 CyCog: CyCog3427 CyCog Size: 25 NCBI COG: COG683 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MED4_ARR_0965_x_at |
>PMED4_10821 MGQLPNLNEFMRISRRILAGLATASLAVSVTSCGGGSDTSGSFDDTVTVGILHSLSGTMAISESTLVDTEKMAIAEINAAGGVTVGGKSYKIDYIVEDGA SDWPTFAEKSKKLIDQDGVPVVFGGWTSASRKAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGASPNQQSEPATDFMYKRSPAAGKPFFLVGSDYVFPR TSNTITKEQLKSLGGKVVGEDYLPLGNTEVAPIISKIKKALAPSGGGVIINTLNGDQNVAFFKQIQDAGITPSNGYYVMNYSIAEEEISTIGPEFLEGHY GAWNYMMSIDTPESKKFAADFKALYGSDRVVADPQESAYNMVYLWKQAVEDAGTFENSAVREALVGQTFDAPQGPVEVMPNHHLAQTVRIGLIKPEGGFE ILEETDGVVYPQAWNQFEPSSKGYACDWTDPSKGERYKL >PMED4_10821 GTGGGTCAATTACCTAATTTAAACGAATTCATGAGAATTTCAAGGCGTATTTTGGCAGGTTTAGCTACTGCCTCTCTTGCCGTTTCAGTTACTTCCTGCG GAGGAGGTTCAGACACTTCCGGAAGTTTCGATGACACAGTAACTGTTGGTATCTTACATTCCCTTTCAGGAACAATGGCCATATCTGAATCAACTCTTGT TGATACCGAAAAAATGGCAATAGCAGAAATAAACGCAGCCGGCGGAGTAACCGTTGGTGGAAAAAGCTACAAAATCGATTACATCGTTGAAGATGGTGCT TCCGACTGGCCAACATTTGCTGAGAAGTCTAAAAAATTAATCGACCAGGATGGTGTTCCAGTTGTATTTGGTGGATGGACATCTGCTAGTAGAAAGGCAA TGCTTCCTGTGTATGAATCAAAAGATGCATTCCTTTACTACCCAATTCAGTATGAAGCTCAGGAATGTTCAAACAATATTTTCTACACAGGTGCTTCACC AAACCAACAATCAGAACCAGCTACTGATTTTATGTATAAGAGATCTCCTGCCGCTGGAAAGCCATTTTTCCTAGTTGGTTCAGACTATGTTTTCCCAAGG ACATCAAATACAATTACCAAAGAACAACTTAAATCACTTGGTGGAAAGGTTGTAGGTGAAGATTATTTACCTCTAGGTAATACTGAGGTTGCTCCTATTA TTTCCAAGATCAAAAAAGCATTAGCACCATCTGGTGGTGGAGTAATTATCAACACACTTAATGGTGACCAAAACGTTGCTTTCTTTAAACAGATTCAGGA TGCTGGGATTACTCCAAGTAATGGATATTATGTAATGAACTACTCTATTGCAGAGGAAGAAATTAGTACTATTGGGCCTGAATTCTTAGAAGGCCATTAT GGTGCTTGGAACTACATGATGTCTATCGACACACCTGAATCCAAGAAATTTGCAGCTGATTTTAAAGCTCTATATGGAAGTGACAGAGTAGTTGCCGATC CACAGGAATCTGCTTACAACATGGTTTATTTATGGAAACAAGCAGTTGAAGATGCAGGCACATTTGAGAACAGTGCTGTTAGAGAAGCTCTAGTAGGACA AACATTCGATGCTCCTCAAGGACCAGTTGAGGTTATGCCTAACCATCACCTTGCTCAAACAGTAAGAATTGGTTTAATCAAGCCAGAAGGTGGATTTGAG ATTCTTGAAGAAACTGATGGAGTTGTATACCCACAAGCATGGAACCAATTTGAACCTAGTTCAAAAGGTTATGCATGTGACTGGACAGACCCATCTAAAG GAGAAAGATATAAGCTTTAA