Browse Site Data
GenomesAffymetrix Probeset: MED4_ARR_1023_x_at
| Probeset Position: 972906..973154(+) |
| Number of probes: 10 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 1201.53 | 1831.5 | 0.656036 | -0.608153 | 0.1603 |
| Phosphate Starvation | P-depleted | 4 h | 1646.0 | 2027.5 | 0.811837 | -0.300738 | 0.2843 |
| Phosphate Starvation | P-depleted | 12 h | 1526.63 | 2734.0 | 0.558387 | -0.840663 | 0.018 |
| Phosphate Starvation | P-depleted | 24 h | 2102.33 | 1984.0 | 1.05964 | 0.0835772 | 0.812 |
| Phosphate Starvation | P-depleted | 48 h | 1217.5 | 1809.5 | 0.672838 | -0.571669 | 0.117 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 1.91647 | 0.938455 | 0.0322581 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 1.57442 | 0.654816 | 0.74701 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 0.587223 | -0.76802 | 0.0588235 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 0.0769009 | -3.70086 | 0.0 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 0.325727 | -1.61826 | 0.0311111 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 0.358361 | -1.48051 | 0.115169 |
| Nitrogen Availability | Urea | log phase | NA | NA | 2.0831 | 1.05873 | 0.0 |
| Nitrogen Availability | Cyanate | log phase | NA | NA | 1.30017 | 0.378705 | 0.92369 |
| Light Sensing | High light | 45 min | NA | NA | 0.1516 | -2.72166 | 0.0 |
| Light Sensing | White light | 45 min | NA | NA | 0.2833 | -1.8196 | 0.0 |
| Light Sensing | Blue light | 45 min | NA | NA | 0.2818 | -1.82726 | 0.0 |
| Light Sensing | Red light | 45 min | NA | NA | 0.3527 | -1.50349 | 0.0 |
| Light Sensing | Green light | 45 min | NA | NA | 3.3927 | 1.76243 | 0.0 |
| Light Sensing | White light+DCMU | 45 min | NA | NA | 3.3927 | 1.76243 | 0.0 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.200378798 | 0.892165741 |
| Iron Availability | -Fe | 12 h | 0.0 | NA | None | -0.422752464 | 0.079035116 |
| Iron Availability | -Fe | 24 h | 0.0 | NA | None | -0.321928095 | 0.073246947 |
| Iron Availability | -Fe | 48 h | 0.0 | NA | None | -0.612637459 | 0.00318385 |
| Iron Availability | -Fe | 70 h rescue | 0.0 | NA | None | 1.937721026 | 2.98771e-08 |
Protein Info: PMED4_11701 conserved hypothetical
Location: 972906 - 973154 (+) on scaffold: NC_005072
Protein Length: 82 aa
|
Genome: MED4 Alternative Tag: PMM1028 MicrobesOnline ID: VIMSS566383 CyCog: CyCog3327 CyCog Size: 29 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MED4_ARR_1023_x_at |
>PMED4_11701 MDFIISIFLASVMWVQVPQWEADWSKCAVDVPDTSCHWYVAAPDNTFGEGFDWESAPWFDANGLQDVAKIEKESVVEKLQKN >PMED4_11701 ATGGATTTTATAATTTCTATTTTTCTAGCTTCTGTTATGTGGGTTCAAGTTCCTCAATGGGAGGCTGATTGGTCAAAGTGTGCAGTAGATGTTCCTGATA CATCATGTCATTGGTATGTCGCTGCACCCGATAATACCTTTGGAGAAGGATTTGATTGGGAAAGTGCCCCTTGGTTTGATGCTAACGGACTTCAAGATGT AGCAAAAATTGAGAAAGAAAGTGTAGTAGAAAAGCTTCAAAAAAATTAG