Browse Site Data
GenomesAffymetrix Probeset: MED4_ARR_1255_x_at
| Probeset Position: 1216278..1216901(-) |
| Number of probes: 11 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 709.53 | 990.2 | 0.716552 | -0.480856 | 0.1126 |
| Phosphate Starvation | P-depleted | 4 h | 511.45 | 522.15 | 0.979508 | -0.0298711 | 0.6562 |
| Phosphate Starvation | P-depleted | 12 h | 672.53 | 690.6 | 0.973834 | -0.0382516 | 0.859 |
| Phosphate Starvation | P-depleted | 24 h | 853.93 | 731.2 | 1.16785 | 0.223852 | 0.634 |
| Phosphate Starvation | P-depleted | 48 h | 774.7 | 673.15 | 1.15086 | 0.20271 | 0.173 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 1.00672 | 0.0096695 | 0.967118 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 0.970261 | -0.0435556 | 0.984054 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 1.14562 | 0.19613 | 0.738798 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 1.12053 | 0.16418 | 0.711339 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 4.53411 | 2.18082 | 0.0 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 4.71726 | 2.23795 | 0.0051282 |
| Nitrogen Availability | Urea | log phase | NA | NA | 0.965026 | -0.0513597 | 0.941865 |
| Nitrogen Availability | Cyanate | log phase | NA | NA | 0.771829 | -0.373647 | 0.871833 |
| Light Sensing | High light | 45 min | NA | NA | 0.521 | -0.940645 | 0.0 |
| Light Sensing | White light | 45 min | NA | NA | 0.85 | -0.234465 | 0.0 |
| Light Sensing | Blue light | 45 min | NA | NA | 0.6401 | -0.643631 | 0.0 |
| Light Sensing | Red light | 45 min | NA | NA | 0.6895 | -0.536378 | 0.0 |
| Light Sensing | Green light | 45 min | NA | NA | 1.1784 | 0.236829 | 0.0 |
| Light Sensing | White light+DCMU | 45 min | NA | NA | 1.17841 | 0.236841 | 0.0 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.299830762 | 0.829384905 |
| Iron Availability | -Fe | 12 h | 0.0 | NA | None | -0.049904906 | 0.698380173 |
| Iron Availability | -Fe | 24 h | 0.0 | NA | None | 0.453122447 | 0.009330567 |
| Iron Availability | -Fe | 48 h | 0.0 | NA | None | 0.303342394 | 0.054625126 |
| Iron Availability | -Fe | 70 h rescue | 0.0 | NA | None | -0.682695932 | 0.000137661 |
Protein Info: PMED4_14281 SOS function regulatory protein, LexA repressor (lexA)
Location: 1216278 - 1216901 (-) on scaffold: NC_005072
Protein Length: 207 aa
|
Genome: MED4 Alternative Tag: PMM1262 MicrobesOnline ID: VIMSS566623 CyCog: CyCog3773 CyCog Size: 24 NCBI COG: COG1974 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MED4_ARR_1255_x_at |
>PMED4_14281 MPPSIDNDLTAAQNELFNWIKNYMRDFQHSPSIRQMMKAMGLKSPAPVQSRLRHLQDKGYISWQEGKARTMQIVDEIFEGVPIMGSVAAGGLIETFSDLQ ENLDVSEIFRKKDVFALTVNGDSMIDACIADGDMVLMEPIKDSFSLRNGTIVSALVPGLGTTLKYFFKRNGKIYLEAANPAYDPIELNLNEVTFQGKLLA VWRSVRN >PMED4_14281 ATGCCCCCTTCTATTGATAATGATCTTACCGCTGCTCAAAATGAGCTTTTTAACTGGATAAAAAATTATATGCGAGATTTTCAACATAGTCCCTCTATTA GACAAATGATGAAAGCTATGGGTTTGAAATCTCCAGCCCCTGTTCAAAGTCGCTTAAGGCATTTGCAAGATAAGGGATATATATCCTGGCAAGAAGGAAA AGCTAGAACTATGCAAATAGTTGATGAGATCTTTGAGGGAGTCCCAATTATGGGTTCAGTGGCAGCTGGTGGCTTAATTGAAACATTTTCCGACCTCCAA GAAAATTTAGATGTCTCAGAAATTTTTAGAAAAAAAGATGTTTTTGCACTTACAGTAAATGGCGATTCAATGATCGATGCATGTATTGCTGATGGGGATA TGGTTTTGATGGAACCAATTAAGGATTCATTTTCCTTAAGAAACGGAACCATTGTAAGTGCATTGGTTCCTGGTTTAGGGACAACTTTAAAATATTTCTT TAAAAGAAATGGGAAGATATATTTAGAAGCAGCAAATCCTGCCTATGATCCTATTGAATTAAACTTAAATGAAGTTACTTTTCAAGGCAAGTTATTAGCT GTATGGAGATCAGTTAGAAATTGA