Browse Site Data
GenomesAffymetrix Probeset: MED4_ARR_1311_x_at
| Probeset Position: 1271269..1271598(-) |
| Number of probes: 11 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 17.11 | 18.01 | 0.950028 | -0.0739584 | 0.65 |
| Phosphate Starvation | P-depleted | 4 h | 17.71 | 12.79 | 1.38468 | 0.469548 | 0.3257 |
| Phosphate Starvation | P-depleted | 12 h | 26.74 | 17.29 | 1.54656 | 0.629062 | 0.1439 |
| Phosphate Starvation | P-depleted | 24 h | 25.31 | 27.85 | 0.908797 | -0.13797 | 0.816 |
| Phosphate Starvation | P-depleted | 48 h | 32.96 | 15.62 | 2.11012 | 1.07732 | 0.0944 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 0.158228 | -2.65992 | 0.237487 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 0.576529 | -0.794536 | 0.797655 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 1.14215 | 0.191756 | 0.823752 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 0.84739 | -0.238901 | 0.743711 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 0.703903 | -0.506552 | 0.933255 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 0.590532 | -0.759912 | 0.516808 |
| Nitrogen Availability | Urea | log phase | NA | NA | 0.923207 | -0.115274 | 0.984978 |
| Nitrogen Availability | Cyanate | log phase | NA | NA | 1.36532 | 0.449236 | 0.969589 |
| Light Sensing | High light | 45 min | NA | NA | 1.0474 | 0.0668125 | 0.0 |
| Light Sensing | White light | 45 min | NA | NA | 1.3691 | 0.453228 | 0.0 |
| Light Sensing | Blue light | 45 min | NA | NA | 0.9769 | -0.0337172 | 0.0 |
| Light Sensing | Red light | 45 min | NA | NA | 1.3325 | 0.414136 | 0.0 |
| Light Sensing | Green light | 45 min | NA | NA | 0.8109 | -0.302404 | 0.0 |
| Light Sensing | White light+DCMU | 45 min | NA | NA | 0.810888 | -0.302425 | 0.0 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.002882509 | 0.949369894 |
| Iron Availability | -Fe | 12 h | 0.0 | NA | None | -0.454031631 | 0.098800358 |
| Iron Availability | -Fe | 24 h | 0.0 | NA | None | -0.450084446 | 0.023582635 |
| Iron Availability | -Fe | 48 h | 0.0 | NA | None | -0.668868078 | 0.001371129 |
| Iron Availability | -Fe | 70 h rescue | 0.0 | NA | None | -0.035046947 | 0.327330712 |
Protein Info: SSSM7_176 heat shock protein (Hsp20)
Location: 149335 - 149766 (+) on scaffold: None
Protein Length: 143 aa
|
Genome: S-SSM7 Alternative Tag: SSSM7_176 MicrobesOnline ID: VIMSS PhCOG: PhCOG172 PhCOG Size: 18 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
>SSSM7_176 MTNIQRYHTQDLGTLVDKIMKNSVGMDDYFNQFFNFDSTTNYPPYNLVQINNVDSRLEIALAGFSKEEVKVYTEYGRIVVEGKKEKTEEESEYLHRGLAQ RSFQRAWALSEDITVKDVNFADGLLTIKLGKVIPEHHARKDYL >SSSM7_176 ATGACTAACATTCAAAGATATCATACTCAGGATCTGGGCACACTAGTTGACAAGATCATGAAGAACAGCGTTGGTATGGACGATTACTTCAACCAGTTCT TCAATTTTGATTCCACTACTAATTACCCGCCCTACAATCTTGTACAAATTAACAATGTAGATTCTAGACTAGAAATTGCACTTGCTGGATTCAGTAAGGA AGAAGTTAAAGTCTACACAGAGTACGGACGGATTGTTGTAGAGGGTAAGAAAGAAAAAACAGAAGAAGAATCTGAGTATCTACACAGAGGTTTGGCTCAG AGATCTTTCCAGAGAGCCTGGGCATTGTCAGAAGACATTACAGTTAAGGATGTAAATTTTGCAGATGGACTTCTCACAATTAAACTGGGCAAAGTGATAC CAGAACATCATGCACGGAAAGACTACCTATAA