Browse Site Data
GenomesAffymetrix Probeset: MED4_ARR_1382_x_at
| Probeset Position: 1341464..1341688(+) |
| Number of probes: 10 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 4.79 | 5.31 | 0.902072 | -0.148686 | 0.4935 |
| Phosphate Starvation | P-depleted | 4 h | 4.19 | 4.11 | 1.01946 | 0.0278119 | 0.6425 |
| Phosphate Starvation | P-depleted | 12 h | 9.1 | 6.62 | 1.37462 | 0.459035 | 0.2792 |
| Phosphate Starvation | P-depleted | 24 h | 6.28 | 8.84 | 0.710407 | -0.493282 | 0.575 |
| Phosphate Starvation | P-depleted | 48 h | 7.31 | 4.91 | 1.4888 | 0.574148 | 0.104 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 0.604205 | -0.72689 | 0.263755 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 1.20737 | 0.27187 | 0.946 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 2.81963 | 1.49551 | 0.0598802 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 5.48353 | 2.45511 | 0.0 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 3.81691 | 1.93241 | 0.183721 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 5.96641 | 2.57686 | 0.0051282 |
| Nitrogen Availability | Urea | log phase | NA | NA | 1.43048 | 0.516495 | 0.885988 |
| Nitrogen Availability | Cyanate | log phase | NA | NA | 2.37125 | 1.24565 | 0.953996 |
| Light Sensing | High light | 45 min | NA | NA | 0.9866 | -0.0194628 | 0.0 |
| Light Sensing | White light | 45 min | NA | NA | 1.1441 | 0.194213 | 0.0 |
| Light Sensing | Blue light | 45 min | NA | NA | 0.9163 | -0.126108 | 0.0 |
| Light Sensing | Red light | 45 min | NA | NA | 1.0319 | 0.0453032 | 0.0 |
| Light Sensing | Green light | 45 min | NA | NA | 0.849 | -0.236164 | 0.0 |
| Light Sensing | White light+DCMU | 45 min | NA | NA | 0.848953 | -0.236244 | 0.0 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | -0.013043037 | 0.950956131 |
| Iron Availability | -Fe | 12 h | 0.0 | NA | None | 0.492622329 | 0.293429414 |
| Iron Availability | -Fe | 24 h | 0.0 | NA | None | 0.199122642 | 0.350007135 |
| Iron Availability | -Fe | 48 h | 0.0 | NA | None | 0.318461465 | 0.146466061 |
| Iron Availability | -Fe | 70 h rescue | 0.0 | NA | None | -1.36215794 | 1.47399e-05 |
Protein Info: PMED4_15871 possible Helix-turn-helix protein, copG family
Location: 1341464 - 1341688 (+) on scaffold: NC_005072
Protein Length: 74 aa
|
Genome: MED4 Alternative Tag: PMM1391 MicrobesOnline ID: VIMSS566757 CyCog: CyCog7162 CyCog Size: 7 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MED4_ARR_1382_x_at |
>PMED4_15871 MPERTQLNININPDLLKNLKKIALENNRKLVELINEVLTNYIQEIKNDQTKYRSILDELDDVKNRISVLENSKN >PMED4_15871 ATGCCAGAAAGGACTCAATTAAATATAAATATCAATCCAGACTTATTAAAAAACCTCAAAAAAATAGCATTAGAAAATAATAGAAAGTTAGTTGAATTGA TTAATGAAGTCCTGACGAATTATATTCAAGAAATAAAAAACGATCAAACAAAATATAGGAGTATTTTAGACGAATTAGATGATGTCAAAAATAGAATATC AGTTTTAGAAAATTCAAAAAATTAA