Browse Site Data
GenomesAffymetrix Probeset: MED4_ARR_1476_x_at
| Probeset Position: 1423552..1424346(-) |
| Number of probes: 11 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 129.33 | 138.6 | 0.933117 | -0.0998703 | 0.6677 |
| Phosphate Starvation | P-depleted | 4 h | 145.65 | 90.05 | 1.61743 | 0.693707 | 0.2694 |
| Phosphate Starvation | P-depleted | 12 h | 135.23 | 106.01 | 1.27563 | 0.351215 | 0.4507 |
| Phosphate Starvation | P-depleted | 24 h | 138.88 | 151.3 | 0.917911 | -0.123573 | 0.781 |
| Phosphate Starvation | P-depleted | 48 h | 132.7 | 90.64 | 1.46403 | 0.549949 | 0.126 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 0.550242 | -0.861863 | 0.183274 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 0.647196 | -0.627726 | 0.75528 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 0.694753 | -0.525427 | 0.46445 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 0.487749 | -1.03579 | 0.0668842 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 0.864828 | -0.209514 | 0.927641 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 0.200095 | -2.32125 | 0.0539216 |
| Nitrogen Availability | Urea | log phase | NA | NA | 0.914677 | -0.128665 | 0.919596 |
| Nitrogen Availability | Cyanate | log phase | NA | NA | 1.06753 | 0.0942783 | 0.985274 |
| Light Sensing | High light | 45 min | NA | NA | 1.4219 | 0.50782 | 0.0 |
| Light Sensing | White light | 45 min | NA | NA | 1.3308 | 0.412294 | 0.0 |
| Light Sensing | Blue light | 45 min | NA | NA | 0.9388 | -0.0911103 | 0.0 |
| Light Sensing | Red light | 45 min | NA | NA | 1.2383 | 0.308361 | 0.0 |
| Light Sensing | Green light | 45 min | NA | NA | 0.8265 | -0.274913 | 0.0 |
| Light Sensing | White light+DCMU | 45 min | NA | NA | 0.826452 | -0.274996 | 0.0 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.194087052 | 0.86171024 |
| Iron Availability | -Fe | 12 h | 0.0 | NA | None | -0.30222618 | 0.25029798 |
| Iron Availability | -Fe | 24 h | 0.0 | NA | None | -0.17299399 | 0.187141627 |
| Iron Availability | -Fe | 48 h | 0.0 | NA | None | -0.234465254 | 0.080207432 |
| Iron Availability | -Fe | 70 h rescue | 0.0 | NA | None | 0.543000877 | 0.001229352 |
Protein Info: PMED4_16961 possible deoxyribonuclease, TatD family (tatD)
Location: 1423552 - 1424346 (-) on scaffold: NC_005072
Protein Length: 264 aa
|
Genome: MED4 Alternative Tag: PMM1486 MicrobesOnline ID: VIMSS566852 CyCog: CyCog4041 CyCog Size: 24 NCBI COG: COG84 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MED4_ARR_1476_x_at |
>PMED4_16961 MNNIELIDSHCHLIFENFEEDLEEVVSRWRSIGVKKLLHACCELSEIPKLKNISRRFDELYYSVGLHPLEANKWECNSKSIMKDAAQCDSRVVAIGELGL DFFKSDNTNKQIDALVPQMHLACELDLPVIIHCREAANEMIKICHDLSKQGICPKGVLHCWSGTPDEMKQFLDLGFYISFSGIVTFPKAYEIHECARIVP SDRYLIETDAPFLAPVPYRGKRNEPAFVESVAKSIASLRSSDLKSIADESSRNAEDLFKFDLIN >PMED4_16961 ATGAACAATATTGAACTGATTGATTCTCATTGTCATTTGATATTTGAAAATTTTGAAGAGGATCTTGAAGAAGTTGTTTCAAGATGGCGTTCAATAGGTG TAAAAAAATTGCTCCATGCATGTTGTGAATTATCAGAAATTCCTAAATTAAAAAATATATCTCGAAGATTTGATGAATTGTATTACTCAGTTGGTTTACA TCCTCTTGAAGCTAACAAATGGGAATGTAATTCTAAATCCATAATGAAAGATGCAGCCCAATGTGATTCAAGAGTTGTTGCTATTGGTGAATTAGGATTA GATTTTTTTAAAAGTGATAATACAAATAAACAGATAGATGCGCTTGTTCCACAAATGCATTTAGCCTGCGAACTTGACTTGCCCGTCATTATCCATTGTA GAGAAGCTGCAAATGAGATGATAAAAATATGTCACGATTTATCTAAACAAGGTATATGTCCTAAAGGAGTTTTGCACTGTTGGAGTGGCACTCCAGATGA GATGAAGCAATTTTTAGATCTAGGATTTTATATAAGTTTTAGTGGGATAGTTACATTCCCAAAAGCATACGAAATTCATGAATGCGCAAGAATTGTTCCG AGTGATAGATATTTAATTGAAACAGATGCTCCCTTTTTAGCCCCTGTCCCATATCGAGGGAAAAGAAATGAGCCAGCTTTTGTTGAAAGTGTAGCTAAAT CTATAGCCAGTTTAAGATCTTCAGACTTGAAAAGTATTGCAGATGAGTCTTCTAGGAATGCTGAAGATTTGTTTAAATTTGACTTGATAAATTAA