Browse Site Data
GenomesAffymetrix Probeset: MIT9313_ARR_0280_x_at
| Probeset Position: 322753..324363(+) |
| Number of probes: 20 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 588.1 | 594.75 | 0.988819 | -0.016222 | 0.9971 |
| Phosphate Starvation | P-depleted | 4 h | 723.6 | 724.55 | 0.998689 | -0.00189288 | 0.9632 |
| Phosphate Starvation | P-depleted | 12 h | 765.15 | 860.25 | 0.889451 | -0.169013 | 0.9187 |
| Phosphate Starvation | P-depleted | 24 h | 757.4 | 943.25 | 0.802969 | -0.316585 | 0.2805 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 1.53789 | 0.620949 | 0.388489 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 0.999399 | -0.000867556 | 0.999899 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 0.988785 | -0.0162718 | 0.9591 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 0.883852 | -0.178123 | 0.925853 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 0.899446 | -0.152892 | 0.693688 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 1.12881 | 0.174804 | 0.655364 |
| Nitrogen Availability | Urea | log phase | NA | NA | 3.37773 | 1.75606 | 0.0 |
| Nitrogen Availability | Nitrite | log phase | NA | NA | 0.818141 | -0.289579 | 0.866465 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.18606493 | 1.04659836 |
| Iron Availability | -Fe | 16 h | 0.0 | NA | None | 0.321928095 | 0.169847102 |
| Iron Availability | -Fe | 28 h | 0.0 | NA | None | 0.270229907 | 0.492111924 |
| Iron Availability | -Fe | 53 h | 0.0 | NA | None | 1.511973982 | 0.000223604 |
| Iron Availability | -Fe | 72 h rescue | 0.0 | NA | None | 1.751465164 | 0.000307308 |
Protein Info: P9313_03361 possible porin (som)
Location: 322753 - 324363 (+) on scaffold: NC_005071
Protein Length: 536 aa
|
Genome: MIT9313 Alternative Tag: PMT0284 MicrobesOnline ID: VIMSS567384 CyCog: CyCog4464 CyCog Size: 21 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MIT9313_ARR_0280_x_at |
>P9313_03361 MKLFQQLLVAPAALGLMAPMAANAADLDIKGVSDYSASSEQVTSISQFQDVYPTDWAYQALSNLIERYGCVAGYPSGSYLGNRAMTRFEAAALLNACLDR ITEVTDELRRLMQEFEQELAILKGRVDGLEARVGELEATQFSTTTKLNGKAHMVLGGTSYTGDETDDLTDDGDYLGTDALTFNYTLQLDLNTSFTGKDLL YTRLKTGNFADSAFGGKGYVKPAYLNVANNNQDVVKVDKLWYTFPIGDDFTAWIGAKIENYYMLGSAPSLYQPILKAFKLGGNYGVYGASTGQGLGLAWK SPVDDPMDARFGISANYVAKEGDNGDPSDGGVGNGNSKGKFLAKVDYGNPQWQVSAAYAYTQQGMTQGFGTSDGGASVYSKCRGTSSCGADSNGVAFRAF WQPDEPGLIPSFSVGYDFTDYNLPDEAADGTREQSMAWFAGMMWKDAFIEGNTLGAAVSELQWVTQQKGDDTPDDGNMAFELWYKFQVTDNISVTPAVFY LSRPFGEKTGTATKYGGKGADTFGTFGGLVQTTFKF >P9313_03361 ATGAAACTCTTCCAGCAATTGCTGGTGGCACCTGCTGCCTTGGGCCTGATGGCCCCCATGGCTGCTAATGCCGCAGACCTAGACATCAAAGGTGTGTCCG ATTATTCGGCCTCCAGCGAGCAGGTCACCAGCATCTCCCAATTCCAAGATGTTTACCCAACCGACTGGGCTTATCAGGCGCTGAGCAACCTGATTGAGCG CTACGGCTGTGTAGCTGGCTATCCAAGCGGTAGCTACTTGGGCAACAGAGCAATGACCCGCTTTGAAGCGGCTGCTCTATTGAATGCCTGCCTCGATCGC ATCACTGAGGTAACTGACGAACTGCGTCGCTTGATGCAGGAATTCGAGCAGGAGCTCGCCATCCTCAAGGGCCGTGTTGATGGGCTAGAAGCCCGCGTTG GTGAACTCGAGGCCACTCAGTTCTCCACCACTACCAAGCTGAACGGTAAGGCCCATATGGTTCTTGGCGGAACCAGCTATACCGGTGACGAGACCGATGA CCTTACGGATGATGGGGACTATCTGGGAACTGACGCACTTACTTTCAACTACACTCTGCAGTTAGATCTGAACACCAGTTTCACGGGTAAGGATCTTCTC TATACTCGTCTGAAGACAGGTAACTTTGCAGATAGTGCATTTGGTGGCAAGGGTTATGTGAAGCCCGCCTACTTGAATGTTGCCAATAACAATCAAGATG TCGTTAAAGTCGACAAGCTTTGGTATACCTTCCCCATTGGTGACGACTTCACTGCTTGGATTGGTGCCAAGATTGAAAACTACTACATGCTTGGTAGTGC ACCATCACTTTACCAGCCAATCTTGAAAGCCTTCAAGTTGGGTGGTAACTATGGTGTTTACGGTGCAAGTACAGGGCAAGGCTTAGGTTTGGCCTGGAAG TCGCCAGTCGACGATCCGATGGATGCCAGGTTTGGCATTAGTGCCAATTATGTGGCCAAAGAAGGCGACAATGGTGATCCTTCTGATGGTGGTGTAGGCA ACGGTAATTCCAAAGGTAAGTTTCTCGCCAAGGTCGATTACGGCAATCCTCAGTGGCAAGTTTCTGCGGCTTATGCCTACACCCAACAAGGCATGACTCA AGGCTTTGGTACGTCAGATGGTGGTGCCAGCGTCTATAGCAAGTGCAGAGGCACAAGTTCTTGTGGTGCTGATTCCAATGGAGTCGCGTTTAGAGCTTTT TGGCAGCCAGATGAGCCAGGCTTGATTCCTTCCTTCAGTGTTGGTTACGACTTCACTGATTACAACCTGCCAGATGAGGCAGCAGATGGCACCCGCGAGC AAAGCATGGCTTGGTTCGCAGGCATGATGTGGAAGGATGCCTTCATTGAGGGCAATACCCTTGGCGCTGCAGTCTCTGAGCTTCAGTGGGTGACCCAACA GAAGGGTGATGACACTCCTGATGACGGCAACATGGCGTTCGAGCTGTGGTACAAGTTCCAGGTCACAGATAACATCTCTGTGACACCAGCTGTTTTCTAT CTGAGCCGTCCGTTTGGAGAGAAAACAGGAACAGCTACAAAGTACGGTGGCAAAGGAGCTGATACTTTCGGTACCTTCGGTGGCCTCGTTCAAACGACAT TTAAGTTCTGA