Browse Site Data
GenomesAffymetrix Probeset: MIT9313_ARR_2082_x_at
| Probeset Position: 2213711..2214793(+) |
| Number of probes: 14 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 169.5 | 157.95 | 1.07312 | 0.101817 | 0.9971 |
| Phosphate Starvation | P-depleted | 4 h | 149.35 | 139.5 | 1.07061 | 0.0984321 | 0.7608 |
| Phosphate Starvation | P-depleted | 12 h | 138.6 | 143.75 | 0.964174 | -0.0526346 | 0.952 |
| Phosphate Starvation | P-depleted | 24 h | 151.75 | 160.4 | 0.946072 | -0.0799776 | 0.4336 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 1.36578 | 0.449723 | 0.778975 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 0.516206 | -0.953981 | 0.770871 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 0.210004 | -2.25151 | 0.0489978 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 0.535116 | -0.902077 | 0.910256 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 0.478759 | -1.06263 | 0.503239 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 2.34275 | 1.2282 | 0.230114 |
| Nitrogen Availability | Urea | log phase | NA | NA | 0.767705 | -0.381376 | 0.706239 |
| Nitrogen Availability | Nitrite | log phase | NA | NA | 0.755079 | -0.4053 | 0.914998 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.010063683 | 0.997455723 |
| Iron Availability | -Fe | 16 h | 0.0 | NA | None | 0.30222618 | 0.205843341 |
| Iron Availability | -Fe | 28 h | 0.0 | NA | None | 0.152003093 | 0.596613518 |
| Iron Availability | -Fe | 53 h | 0.0 | NA | None | 0.317304068 | 0.084315122 |
| Iron Availability | -Fe | 72 h rescue | 0.0 | NA | None | 0.283329168 | 0.208918785 |
Protein Info: P9313_26341 Aminotransferases class-I (hisC/cobC)
Location: 2213711 - 2214793 (+) on scaffold: NC_005071
Protein Length: 360 aa
|
Genome: MIT9313 Alternative Tag: PMT2100 MicrobesOnline ID: VIMSS569243 CyCog: CyCog2549 CyCog Size: 24 NCBI COG: COG79 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MIT9313_ARR_2082_x_at |
>P9313_26341 MSSAPSLHGGNRIDEAQRLGCRPEQLLDASASLVPFPPSRALQGCLRRALTDNTLRDYPDRSHQRLRDVISNWHGVDPLMVLPGNGAAELFTWAARDAAS EGVSGLPSPGFADYGRALRCWQACQQALPLPLSWSGEMPQPFPLLSNSDVLWITNPHNPTGQLWSRASLEPLLARYQLVICDEAFLPLVPDGERQSLVSL VVNHPNLVVIRSLTKLFALAGLRLGYAIGTPERLQRWQQWRDPWPLNGLAIAAGIALMADRPAFERWIARVQGWVAQEGLWMQTQLRCLPGIRSYPSAAN FLLIRGDVSLVPLRERMAHRRVLLRDCRSFAELGERWLRIGLQQRSANRRILAAFKALLR >P9313_26341 TTGAGCTCCGCTCCCTCCCTTCACGGTGGCAATCGCATTGATGAGGCGCAACGGCTGGGTTGTCGTCCGGAGCAGCTTTTGGATGCCAGTGCCTCTTTGG TGCCTTTCCCTCCATCACGAGCTTTACAAGGGTGTTTAAGAAGGGCTCTAACTGACAACACGCTGAGGGATTATCCGGATCGCAGCCATCAGCGCTTGCG AGACGTGATCAGCAACTGGCATGGGGTTGATCCCCTGATGGTATTGCCGGGAAATGGCGCAGCGGAACTGTTCACCTGGGCCGCTCGTGATGCGGCGTCT GAGGGCGTGAGTGGCCTGCCTAGTCCAGGCTTTGCTGATTACGGCAGGGCTCTGAGGTGCTGGCAAGCCTGCCAGCAAGCTTTGCCACTGCCCCTCTCCT GGTCTGGTGAGATGCCTCAGCCTTTTCCGCTGCTATCGAATAGCGATGTTCTTTGGATTACCAATCCCCATAACCCTACTGGTCAGTTGTGGAGCAGAGC ATCGCTTGAACCGTTGCTAGCGCGTTATCAGCTGGTTATCTGTGATGAAGCGTTTTTGCCATTGGTGCCCGATGGGGAGCGCCAGTCTCTTGTTTCGCTG GTGGTCAACCACCCCAATCTTGTGGTAATTCGCAGTTTGACAAAGTTGTTTGCCTTGGCCGGATTGCGTTTGGGTTATGCCATTGGCACGCCTGAGCGTT TACAACGTTGGCAGCAATGGCGAGATCCATGGCCTCTTAATGGGTTGGCGATTGCTGCAGGGATTGCATTGATGGCGGATCGTCCTGCCTTCGAGCGCTG GATAGCGCGGGTCCAGGGATGGGTTGCTCAGGAAGGTCTTTGGATGCAAACTCAACTGCGTTGCCTACCAGGGATCCGGTCTTATCCATCTGCCGCCAAC TTCTTGTTGATTCGTGGCGATGTCTCCCTTGTGCCATTACGAGAGAGAATGGCTCATCGGCGCGTGCTGTTGCGTGACTGCCGCTCCTTTGCAGAACTTG GGGAGCGCTGGTTGCGCATTGGTTTGCAGCAGAGGTCAGCCAATCGCCGCATCCTTGCTGCGTTCAAAGCCCTGCTCCGATGA