Browse Site Data
GenomesAffymetrix Probeset: MIT9313_ARR_2222_x_at
| Probeset Position: 2367031..2367921(+) |
| Number of probes: 11 |
| Project | Exp | Time | mean(T) | mean(C) | ratio(T/C) | log2(T/C) | q |
|---|---|---|---|---|---|---|---|
| Phosphate Starvation | P-depleted | 0 h | 125.3 | 129.4 | 0.968315 | -0.0464511 | 0.9971 |
| Phosphate Starvation | P-depleted | 4 h | 120.9 | 121.85 | 0.992204 | -0.011292 | 0.9594 |
| Phosphate Starvation | P-depleted | 12 h | 129.6 | 121.85 | 1.0636 | 0.0889595 | 0.8127 |
| Phosphate Starvation | P-depleted | 24 h | 105.7 | 100.83 | 1.0483 | 0.0680504 | 0.4437 |
| Nitrogen Availability | N deprivation | 0 h | NA | NA | 0.788 | -0.343732 | 0.733842 |
| Nitrogen Availability | N deprivation | 3 h | NA | NA | 2.45735 | 1.2971 | 0.3125 |
| Nitrogen Availability | N deprivation | 6 h | NA | NA | 11.9076 | 3.57382 | 0.0 |
| Nitrogen Availability | N deprivation | 12 h | NA | NA | 19.398 | 4.27784 | 0.0 |
| Nitrogen Availability | N deprivation | 24 h | NA | NA | 17.0952 | 4.09552 | 0.0 |
| Nitrogen Availability | N deprivation | 48 h | NA | NA | 8.77878 | 3.13402 | 0.0 |
| Nitrogen Availability | Urea | log phase | NA | NA | 63.7029 | 5.99329 | 0.0 |
| Nitrogen Availability | Nitrite | log phase | NA | NA | 27.5601 | 4.78451 | 0.0 |
| Iron Availability | -Fe | 0 h | 0.0 | NA | None | 0.307572802 | 1.063517362 |
| Iron Availability | -Fe | 16 h | 0.0 | NA | None | 0.960159735 | 0.012790725 |
| Iron Availability | -Fe | 28 h | 0.0 | NA | None | 0.655171503 | 0.142791132 |
| Iron Availability | -Fe | 53 h | 0.0 | NA | None | 1.038006323 | 0.000811363 |
| Iron Availability | -Fe | 72 h rescue | 0.0 | NA | None | 0.998556583 | 0.004170643 |
Protein Info: P9313_28081 Formate and nitrite transporters (focA)
Location: 2367031 - 2367921 (+) on scaffold: NC_005071
Protein Length: 296 aa
|
Genome: MIT9313 Alternative Tag: PMT2240 MicrobesOnline ID: VIMSS569384 CyCog: CyCog5788 CyCog Size: 13 NCBI COG: COG2116 Submit BLAST to NCBI nr (BLASTp) nt (BLASTn) |
Affymetrix Probeset: MIT9313_ARR_2222_x_at |
>P9313_28081 MDYVLPNELVDGMITAGGKKSSVSIKNLLVRGFYSGAILGLATCLAITVGVQSGMPFLGSVLFPFGFASIVLFGMELVTGNFALLPMATWAGKSTWQATF RNWIWVWIGNFIGCALVALLLATSLTSAGTVEPLAAADGGKGWAVIAAKIMALNKANVVAKYQDLGSTGFFLAFLRGMIANWLVCLGVTMALVSKSVPGK ILACWLPITAFQTMGMEHIVVNMFLHTAGPMLGSGVSFGQVIVWNFIPVTLGNIIGGMVFIGMLFYSTHRTQMSNVLPTVHDEKLERELAAELGAR >P9313_28081 ATGGACTACGTCCTGCCCAATGAACTCGTCGACGGCATGATTACTGCCGGCGGAAAAAAATCCAGTGTCAGCATTAAAAATCTGCTGGTACGTGGTTTCT ATTCAGGAGCGATTCTTGGCCTAGCCACCTGCTTAGCCATCACCGTAGGAGTCCAGTCTGGAATGCCATTTCTAGGCTCCGTTCTCTTCCCCTTTGGGTT TGCCAGCATCGTGCTCTTCGGCATGGAGCTAGTCACAGGCAACTTCGCCTTATTGCCAATGGCAACCTGGGCAGGGAAAAGCACATGGCAAGCAACCTTC CGCAACTGGATATGGGTTTGGATTGGCAATTTCATCGGCTGTGCATTGGTGGCTCTATTACTCGCCACAAGCCTGACCAGCGCAGGCACAGTTGAGCCAC TTGCGGCAGCCGATGGGGGCAAAGGTTGGGCCGTGATTGCCGCCAAGATCATGGCACTCAATAAGGCCAATGTCGTGGCCAAATATCAAGACCTAGGCAG CACTGGTTTCTTCCTCGCGTTCCTACGCGGCATGATTGCCAACTGGCTGGTTTGTCTTGGGGTCACGATGGCCTTGGTAAGCAAGAGCGTTCCAGGAAAG ATCCTGGCCTGCTGGCTGCCGATCACAGCATTCCAAACCATGGGAATGGAGCACATCGTGGTGAACATGTTCCTGCACACCGCCGGACCCATGCTTGGTT CAGGAGTTTCTTTTGGCCAGGTAATCGTTTGGAACTTCATTCCAGTCACCCTCGGCAACATCATTGGCGGGATGGTGTTTATCGGCATGCTCTTCTACAG CACCCATCGCACCCAAATGAGCAACGTACTGCCGACGGTTCACGATGAGAAGCTGGAACGTGAACTCGCCGCCGAACTAGGCGCACGCTGA